Staphylococcus shinii: JMB28_06160
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Entry
JMB28_06160 CDS
T08256
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00730
Thiamine metabolism
spsd01100
Metabolic pathways
spsd01240
Biosynthesis of cofactors
spsd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JMB28_06160 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JMB28_06160 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsd03016
]
JMB28_06160 (thiI)
Enzymes [BR:
spsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JMB28_06160 (thiI)
Transfer RNA biogenesis [BR:
spsd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JMB28_06160 (thiI)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QRA17756
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Position
1282260..1283483
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AA seq
407 aa
AA seq
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MIYDHILVRYGELTLKGANRKIFVNKLRSNVKRALMPLQGYMVKANRDRMYIELAEGADI
EEMCNRLKKVFGIYSISPVLKIDKTVEAAKELAVRFAKEYEQDDTFKIDVKRSDKNFPYD
TYELQRTLGGAVLSETDHLNVDVHNPDHVIKVEVRLDAIYMYDQVIAGSGGLPVGTGGKT
LLMLSGGIDSPVAGVEVMRRGVTVEAIHFHSPPFTSEKAKEKVIELTRILSERVGPIKLH
IVPFTALQKQVNKEVHERYTMTSTRRMMMRVADKVVHDIDAHAIVNGENLGQVASQTLKS
MYAINHVTSTPVLRPLLTLDKEDIVKKAKDIGTFDVSIQPFEDCCTIFTPKNPVTEPELE
KVEKYESGYDFEPLVQQAADEIETLYITSDYQSEKDSATQALADDLF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgatcatatattagtgaggtacggcgagctaacgttaaaaggagctaaccgt
aaaatatttgtgaacaaattacgttcaaatgtaaagcgtgcgttaatgccattacaagga
tacatggtaaaggcaaatagagatagaatgtatatagaactagcggaaggtgcagatatt
gaagaaatgtgcaatagattaaaaaaagtctttggtatttattcaataagccctgtatta
aaaattgataaaacagtagaagcggcaaaagagttagctgttcgatttgctaaagagtat
gagcaagacgatacgtttaaaattgatgtaaagcgttcggataaaaacttcccatatgac
acatatgaattacaaagaactttaggtggagctgtattaagtgaaactgatcatttaaat
gtagatgttcacaatccagatcacgtgattaaagttgaagtgcgtttagatgctatatac
atgtatgatcaagtgattgcaggctctggcggattacctgttggtactggaggtaaaact
ttattaatgctatctggtggtattgattctccagttgctggtgtagaagttatgcgtaga
ggcgttactgtagaagcgatacatttccatagtccaccgtttacaagtgaaaaagcaaaa
gaaaaagtaatcgaattaacgagaattttatcagaacgtgttggaccaattaaattacac
atcgtgccatttacagcactacaaaaacaggtgaacaaagaagttcatgaacgttatacc
atgacttcaacacgtcgtatgatgatgcgagtagctgacaaagtggtgcatgatattgac
gcgcatgcgattgtaaatggtgagaatttaggccaagttgcaagtcaaacattaaagagt
atgtatgcgataaatcatgtcacatctacgcctgtattacgtcctttactgactttagat
aaagaagatattgttaaaaaagctaaagatataggtacatttgatgtatctatccaaccg
tttgaggattgttgtacaattttcactcctaaaaatccagttactgaaccggagttagaa
aaagtagaaaaatatgaaagtggttacgattttgaaccacttgtacaacaggctgcggac
gaaattgagacattatatattacaagcgattaccaaagtgagaaagattcagctacacaa
gcgctagctgatgatctattttag
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