Shewanella psychrotolerans: K0I62_18440
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Entry
K0I62_18440 CDS
T09306
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00521
Streptomycin biosynthesis
spsj00523
Polyketide sugar unit biosynthesis
spsj00541
O-Antigen nucleotide sugar biosynthesis
spsj01100
Metabolic pathways
spsj01110
Biosynthesis of secondary metabolites
spsj01250
Biosynthesis of nucleotide sugars
Module
spsj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
K0I62_18440 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K0I62_18440 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K0I62_18440 (rfbD)
Enzymes [BR:
spsj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
K0I62_18440 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QYK01305
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All DBs
Position
4205893..4206795
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AA seq
300 aa
AA seq
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MSIQATPPKLRTLVVGHNGQLAQALRTTIPMDVAAKFCGRNQLDIRSARKIDDLLQKQPF
DLLINASGYTAVDAAESQISAAFDLNHRAVKHLAMNCEKRRIKLIHISSDYLFDGKQTRP
YNVSDIPKPINVYGHSKLAGEQALFEYHPSNSTVVRSSWLYSPFGNNFVKTMLKLMMQQQ
QLNVIDDQFGSPTSAIELAHFIWQLAAQETLSPIYHWSDSGITSWFEFARQIELLGRTQG
LITHPVTIVPVHSQKYPAAAQRPHFSALDCQLSHAIRAAKPWQENLSDVIQTLKQQAKEF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacaagctaccccccccaaattaagaacattggtagttggacataatggtcaa
cttgcacaagcattgcgcaccactattccaatggatgtagcagcaaagttctgcggccga
aaccaactcgatatcaggtcggcccgtaaaattgacgatctattacaaaaacagccgttt
gacctgctgattaacgccagcggctacaccgccgtcgatgccgcagaatcgcaaatatcc
gcagcctttgatctcaatcatcgcgcggttaagcaccttgccatgaactgtgaaaaacgg
cggatcaaacttatccatatctcaagtgattatctgttcgacggcaagcaaactcgacct
tataacgtcagcgatataccaaaaccgattaatgtttatggccactctaaactcgcaggc
gaacaagcattatttgaatatcatccaagtaatagcaccgtggttcgcagctcttggctt
tactctccctttggtaataactttgtcaaaaccatgctcaaactgatgatgcagcagcaa
cagctgaacgtaatcgacgaccaattcggtagcccaacctcagccatagagttggcgcat
tttatttggcaacttgcagcgcaagagaccctctcaccgatctatcattggagcgatagc
ggtattacctcttggtttgaatttgccaggcaaattgagttgcttggaagaacccaagga
ctaattacccatcctgtcacaatcgttcctgtccatagtcaaaaatacccagcagcagcc
caacgtcctcattttagtgcattagactgccaactatctcacgcaatcagagccgctaaa
ccatggcaagagaatctcagcgatgtgattcaaaccctcaaacaacaggctaaagagttc
tga
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