Shewanella psychromarinicola: EGC80_04350
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Entry
EGC80_04350 CDS
T09848
Name
(GenBank) lipopolysaccharide heptosyltransferase family protein
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00540
Lipopolysaccharide biosynthesis
spsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EGC80_04350
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsr01005
]
EGC80_04350
Enzymes [BR:
spsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
EGC80_04350
Lipopolysaccharide biosynthesis proteins [BR:
spsr01005
]
Core region
EGC80_04350
BRITE hierarchy
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AZG34227
LinkDB
All DBs
Position
1030141..1031256
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AA seq
371 aa
AA seq
DB search
MPIVSTKQLQTCKRLLFISPVALGDFLYLKTFLIALKKQYGHIEIDIWLDDIRCNSDSWR
LSRSKILQQWMDTEGVFKLTYGCTDSKSAMQSHIEQAKLRQYDIIFCHSVSKSRQYSHIA
RSISDSAFIVSSIPKSASFGWLNKLFFGHSNHIFILNENSLPKSHHITDRYNMIFNQVLG
LSLPPEQLMPTLKVPEAIEPITQSWLNGKFSDLKKQGKLIFLNHLSTNDKKDWKLSQLFS
LIEKISAMDPTQRFIINVTQENFESVSVETEKFTTLTNTQVAVFTVNEHFFELPSLIAHA
DFVVTVDTAILHFAFAAQRPLLAMMREKKPYWAPPESEVSHVMYATEGRGYIEDISVDRV
FQQYKEMNSLS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccaatagtttccacaaagcaattacaaacgtgtaaacgcttactgtttatttcgcca
gttgcgctaggtgactttctttacttaaaaacctttcttattgctttaaaaaagcaatat
ggtcatatagaaatcgacatctggttagatgatattcgttgtaatagtgatagttggcgc
ttatctcgaagtaaaatcttacaacaatggatggatactgaaggcgtatttaagctaact
tacggctgcactgattcaaaatcagccatgcaaagccatattgagcaggcaaagctgcgt
caatatgacatcatattctgtcattcagtcagtaaaagtcgacaatattcacacatcgct
cgcagcataagcgacagtgcttttattgtgtctagtatccctaaaagtgcttcatttgga
tggttaaacaaactgttttttggtcactcaaaccatatttttatattgaacgaaaacagc
cttcctaagtctcatcatattactgatagatacaatatgatatttaatcaggttttggga
ctgagcttaccacctgagcaattaatgcctaccttaaaggttcctgaggccattgagccc
attactcagtcgtggttaaacggcaaatttagtgacctaaaaaagcaagggaaacttatc
tttttaaatcacttatcgactaatgataaaaaagactggaaattatcgcagttattttcc
ctgattgaaaaaatatcagcaatggatccgactcagcgttttatcatcaatgttactcaa
gaaaactttgaatcggttagtgttgaaaccgaaaaatttaccactctaacaaatacacaa
gtggctgttttcaccgtaaacgaacatttttttgaactaccatcactcattgcacacgct
gattttgtggtaacagtcgatacggcaatattgcactttgcttttgctgctcaacggcct
ttattagcgatgatgcgtgagaaaaagccttattgggcgccaccggaaagtgaggtgtcg
cacgtaatgtatgcaacagaaggtagaggttacatcgaagacatcagcgttgatcgagta
ttccaacaatataaagaaatgaactctctcagttaa
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