Shewanella psychromarinicola: EGC80_05650
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Entry
EGC80_05650 CDS
T09848
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_05650 (trmA)
Enzymes [BR:
spsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
EGC80_05650 (trmA)
Transfer RNA biogenesis [BR:
spsr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
EGC80_05650 (trmA)
BRITE hierarchy
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
Methyltransf_11
Met_10
MTS
Methyltransf_31
Methyltransf_12
PrmA
Cons_hypoth95
DREV
Motif
Other DBs
NCBI-ProteinID:
AZG34465
LinkDB
All DBs
Position
complement(1310691..1311788)
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AA seq
365 aa
AA seq
DB search
MNLAAMDPKNYDAQLQQKRIKLEQAFADFNPPKLEVFASEPMHYRMRAEFRMWHEGDDLY
YYMFDKALNAKVRCDQYLPAGLMINQMMAALITELTPNPALRYRLFQIDFLSTLSGEILV
SLLYHRQLDEEWREHATQLKAKLSAQFNVSIIGRARKQKIDLDKDYVTETLTVNAQRLHY
KQIENSFTQPNAKVSVKMLEWAVDATKNSQGDLLELYCGNGNFTIVLAQNFNRVLATELA
KPSVDAAQYNIDINKVNNVQIIRMSAEDFSDAMAKKRQFRRLEGIDLDSYDCNTIFVDPP
RAGIDPETLKLIQGYERILYISCNPETLNDNLLTLGQTHKITRFALFDQFPYTDHMESGV
LLERK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagctgcaatggatcctaaaaactacgatgcacaattacaacaaaagcgcatc
aagctagaacaggcctttgccgatttcaatccaccaaagcttgaagtctttgcttctgag
cctatgcattatcgcatgcgtgctgagtttagaatgtggcatgaaggtgatgacttatat
tactacatgtttgataaagcattgaatgctaaagtgcgttgcgatcaatatttgccagcg
gggttgatgattaatcaaatgatggctgcattaatcaccgaattaactcccaatcctgcg
ttacgctataggctgtttcaaattgactttttatcgacgttaagtggcgagatattggtc
tctttgttatatcaccgtcagcttgatgaagaatggcgcgaacatgcgactcaattaaag
gcaaaattatctgctcaatttaatgtcagtattattggccgagcacgcaaacagaaaatc
gatttagataaagactatgttaccgaaacacttacagtaaacgctcaacgattacattat
aagcagatagaaaatagctttacccagcccaatgctaaagtatccgtaaaaatgttggaa
tgggccgttgatgcaactaaaaacagccaaggagatttacttgagttgtactgtggcaac
ggcaattttactattgtattggcacaaaatttcaatcgcgttttagcaaccgaactggcc
aagccttcagttgatgccgctcagtacaatatcgatattaataaagtcaataatgtccaa
attattcgtatgtctgctgaagactttagtgatgcgatggcgaaaaagcgtcaatttaga
cgtttagaaggcatcgacttagacagttacgattgcaatactatctttgttgacccgcct
cgtgcaggcattgaccctgaaacattaaagcttatacaaggttatgagcggattttgtat
atttcatgcaatccagaaacactgaatgacaatttgttaaccttaggccaaacacataaa
atcactcgctttgcgctatttgaccaattcccctatacagaccacatggaatcaggcgta
ttactagaacgtaagtaa
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