Shewanella psychromarinicola: EGC80_11285
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Entry
EGC80_11285 CDS
T09848
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00906
Carotenoid biosynthesis
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EGC80_11285
Enzymes [BR:
spsr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
EGC80_11285
BRITE hierarchy
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_3
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
AZG35437
LinkDB
All DBs
Position
complement(2569686..2570804)
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AA seq
372 aa
AA seq
DB search
MSRLHNNLNKITKLDIAIIGGGSAGISLAAKLNNVSAVVVEPRTPIERDCSWALWANYAQ
KTQFQTAIKGSWQQWRVTDHHTEVLHSSDQFHYISLSSAKYMGQCEKNLAEGVDLIRATA
EDILTEGIGGSFSAGGQQYKAEKIYDSRPLKVSEDSLKQHFLGWEIRTKAPISDPQIATL
MDFRVDQSRGLHFIYVLPFSDRRLLIESTMISKKLEDKEWYRQAIYQWLKEQEIEIEETL
AEETGIIPMQSINPLDIKSGAIGAASGAVRLSSGYAFASIQEQISKLAECISCGDFSVPA
PIHPFLNHMDKIFNGVLMAHPELGVTIMMRTAKALDADGFARFMLGSATLIDWAKVILAM
PKVSFLKQIFRQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgtcttcataataatttgaataaaataaccaaacttgatatcgccattattggc
ggcggcagtgcaggcataagtcttgctgccaagctgaacaatgtctctgcggttgttgta
gaacccagaacgccgattgagcgagattgtagctgggccttatgggctaattacgcccaa
aaaacacaatttcagaccgctattaaaggtagctggcagcagtggcgagtgactgaccac
cacactgaggttctccacagtagtgaccagttccattatattagcctaagttcagctaaa
tatatgggacagtgtgagaagaatttagccgaaggtgttgatttaattcgtgctacggca
gaagatattcttactgagggaataggtggctcatttagcgccggaggtcaacaatataaa
gctgaaaaaatttatgacagtcgaccactaaaggtttctgaagacagcttaaagcagcat
tttttaggctgggaaattcgtacaaaagccccaatcagtgatccccaaattgcaacttta
atggatttccgcgtagaccaatctcgcgggctccactttatatatgttctgcctttctca
gatcgacgcttgttaattgagtcgactatgatatctaaaaaattggaagacaaagagtgg
tatcgccaagctatttaccaatggcttaaggagcaagaaattgaaatagaggaaacatta
gccgaagaaacgggtattattcccatgcaatcaataaacccattagatataaaatctgga
gcgattggtgctgcaagtggagcagttaggctttcctcaggttatgcatttgccagtatt
caggaacagataagtaaattggctgagtgtatcagttgtggcgatttttcagttcctgca
cctattcacccatttttaaaccatatggataagatatttaatggagtattgatggcacac
cctgagctcggcgttaccattatgatgcgcacggcaaaagcgttagatgctgatggtttt
gcgcgcttcatgctcggttcggctacattaattgattgggctaaagtcattttagctatg
ccaaaagtatcatttttaaaacagatttttcgtcaatga
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