Shewanella psychromarinicola: EGC80_11770
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Entry
EGC80_11770 CDS
T09848
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00730
Thiamine metabolism
spsr01100
Metabolic pathways
spsr01240
Biosynthesis of cofactors
spsr04122
Sulfur relay system
Module
spsr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EGC80_11770 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
EGC80_11770 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_11770 (thiI)
Enzymes [BR:
spsr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
EGC80_11770 (thiI)
Transfer RNA biogenesis [BR:
spsr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EGC80_11770 (thiI)
BRITE hierarchy
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AZG35516
LinkDB
All DBs
Position
2682808..2684262
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKSVRMRFTKMLETNIRNVLKKVDDDAKVQRLYDRILVNVPADKPE
LCDAFAERLACIPGIAHVVQVSEYSFDSIDHIYQQALPRYRDEIAGKTFCVRVKRSGNHD
FNSIDVERYVGGGLNQHTEALGVKLKNPDVTVNLEINQDKLYMVERRIEGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKKYGESHKVR
FVSVPFEPVVEEILERIDNGQMGVVLKRMMMRAATRIADKFGIQALVTGESLGQVSSQTL
TNLNVIDRSTELLILRPLIAMDKQDIINQSRVIGTEEFAKSIPEYCGVISQKPTVKAVLS
KIEAEELKFSEDLIDRIIESAVVMDVRDIEAEMDQQVTETETVKDVASGEIIIDVRAPEE
EEKDPLSIDNVMIKAIPFFKLATQFADLDSSKTYLLYCDRGVMSKLQALYLVEKGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtaccctgaaattatgatgaagagcaagtcggtaagaatg
cgctttaccaaaatgctcgaaaccaatatccgtaatgtacttaaaaaagtggatgacgat
gccaaagtacaacgtttatatgatcgtattttagttaatgtacctgccgataaaccggaa
ttatgtgatgcttttgcagagcgtttagcttgtattccaggtattgctcacgttgtgcaa
gtgagtgagtacagttttgattcgatagatcatatttatcagcaggctttaccaaggtat
cgtgatgaaattgcaggtaaaacattttgtgttcgcgtaaaacgttctggtaatcatgat
tttaattcaatcgatgttgagcgttatgtgggtggggggttaaaccagcacacagaggcg
cttggggtaaagcttaaaaaccctgatgtgaccgttaatcttgaaatcaatcaagataag
ctttacatggtcgagcgtcgtattgaaggactaggcggtttccctatggcgacccaagaa
gatgtattgtcgcttatttcgggcggttttgattctggcgtgtcgagttttcagtttatt
aagaaaggcgcccgtacccattactgtttctttaatttaggtggcgctcaacacgaaatt
ggcgttaagcaagtggcttatcacttgtggaaaaagtatggtgagtcgcacaaagtacgt
tttgtgtcagtgccatttgagcctgtggttgaagagatccttgaacgtattgataacggt
cagatgggggttgtacttaagcgtatgatgatgcgcgctgcaacgcgtattgcggacaaa
ttcggcattcaagcgttagtcacgggagaaagcttaggtcaggtatcgagtcaaacgctg
accaacttgaatgtgattgaccgcagcactgagttattgattttacgcccacttatcgca
atggacaaacaagacattattaatcagagccgtgtgattggcactgaagaatttgctaag
tctattcctgagtattgtggtgttatttcacaaaagccgacggttaaagcggtattgtct
aagattgaagctgaagagcttaagttttctgaagacttgattgatcgcatcattgagtct
gcagtggtgatggatgttcgtgatattgaagcggagatggatcaacaagtgactgaaacc
gaaacagttaaagatgtggcgtcaggcgaaatcattattgacgttcgtgcacctgaagaa
gaagaaaaagatccattatcaattgataatgtgatgattaaagcgatcccattctttaaa
ttagcgacccaatttgctgatttagatagctctaaaacgtatctattatattgtgatcgt
ggggtaatgagtaaactgcaggccttataccttgttgagaagggctatacgaacgtaaaa
gtgtatcgtccttag
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integrated database retrieval system
