Shewanella psychromarinicola: EGC80_12560
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Entry
EGC80_12560 CDS
T09848
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00250
Alanine, aspartate and glutamate metabolism
spsr00410
beta-Alanine metabolism
spsr00430
Taurine and hypotaurine metabolism
spsr00650
Butanoate metabolism
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01120
Microbial metabolism in diverse environments
spsr02024
Quorum sensing
Module
spsr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
EGC80_12560
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EGC80_12560
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EGC80_12560
00430 Taurine and hypotaurine metabolism
EGC80_12560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGC80_12560
Enzymes [BR:
spsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
EGC80_12560
BRITE hierarchy
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Phage_XkdX
Motif
Other DBs
NCBI-ProteinID:
AZG35642
LinkDB
All DBs
Position
complement(2851201..2852583)
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AA seq
460 aa
AA seq
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MPIHKVKQNDQSSLLDIYATNASQESLPKYQMPQGRTEPRIAYAFVHDELMLDGNSRQNL
ATFCTTWVEDEVKQLMTDAVDKNMIDKDEYPQTAEIEKRCVHILADLWHAHKSQETIGCS
TTGSSEAAMLGGLALKWKWRKRREAEGKDSSKPNIVTGPVQICWKKFARYFDVEIREVPL
EGDALGLKPEDLRKYCDENTIGVVATLGVTFTGVYEPVEALSLELDAIEREFGLDIPIHV
DAASGGFIAPFIQRDLVWDFQIDRVKSINASGHKYGLAPLGVGWAIWATQEDLPEELVFY
VDYLGGNMPTFALNFSRPGGEIIAQYYNFLRLGMEGYTAIQQTCSDTAQWLAKQLATLGF
FDMIYDGHGGLPAVAYKLKDEKQGFTLYDLSDRVRMKGWQIASYPLPSNRQNTIVQRILI
RHGVSHDLVQLLLDDIISAIDHLVKNPVPNSTAKPGFNHG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcataaagtaaaacaaaacgatcaatccagcctactagatatctatgcaacc
aatgcctcacaagaaagcttacctaagtatcaaatgccgcaaggtcggaccgaacctcgc
attgcttatgcttttgtccacgatgaactcatgctcgacggaaattctcgtcaaaaccta
gctacattttgtacaacttgggtcgaggacgaggtcaagcagctaatgacagacgcggtt
gacaagaacatgatcgacaaggacgaatacccacaaacagccgaaatagagaaacgctgt
gttcatatacttgcggatctttggcatgcacataaatcacaggaaacgattggatgctcg
acaaccgggtctagtgaggcggcaatgctaggcggtctagccctcaagtggaaatggcgt
aagcgccgtgaagctgagggcaaggactcaagtaagccaaacatcgtgaccggccctgtg
cagatttgctggaagaaattcgcacgttatttcgatgtcgagattcgggaagtaccatta
gagggcgatgcgcttgggttaaaacccgaggacctacgaaaatattgtgacgaaaacact
atcggtgtcgtggcgactctcggagtcaccttcactggtgtctatgaaccagtagaggct
ctgagtcttgaattagatgcgatcgagcgtgagtttggactcgacattccaatccatgtg
gacgctgcctcaggtggttttatagcccccttcattcagcgcgacctagtctgggatttc
cagatagatagagtcaagtcaatcaatgcatccggtcataaatacggtctcgcaccgcta
ggtgttggctgggcgatctgggcaacacaggaagatctaccagaggaattggttttctat
gtcgattaccttggcggcaacatgcctacctttgcgctgaatttctcacgaccaggcggc
gagatcatagcccaatattataacttcttgcgcctgggtatggaaggttatacagctatt
caacagacctgttcggatactgctcagtggttggctaaacaattggcgacacttggattt
ttcgatatgatctatgacggtcacggcggtcttcctgccgtagcctacaagctgaaagac
gagaagcaaggtttcacactttatgatctatcggacagggtgcggatgaagggatggcag
attgcatcttaccctctaccttcgaaccgtcaaaacaccatagttcagcggattttgatt
cggcacggtgtcagccatgatctggtacaactgctgcttgacgatataatatctgcgata
gaccatcttgtaaaaaatccggtgccaaactcaacagcgaagccaggatttaatcatgga
taa
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