Shewanella psychrophila: Sps_01775
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Entry
Sps_01775 CDS
T05063
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsw03016
]
Sps_01775
Enzymes [BR:
spsw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Sps_01775
Transfer RNA biogenesis [BR:
spsw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sps_01775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
Pyr_redox_3
FAD_binding_2
NAD_binding_8
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AQS36939
UniProt:
A0A1S6HN53
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All DBs
Position
1987618..1989720
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AA seq
700 aa
AA seq
DB search
MPKVRHRVNSLTQEHEEKTLNSRIYSHFNSFLTQLAKMYPEKNKLSIGQIGLCDAQQLIS
VILLQQKSMADTRLHMQIFESDLSAVERINLELTALQTQHRECKELAHTDSVLDSELNLQ
ASSGSFADKQAAIEQLIDSKLVAIPGCQRLVLNQGHCLIDLYLGDIHSSLSNTLAPADSA
SYIDAWVHTSDSHGLNEAQLWQMAKLSSQTALLSSVHMNEQQANFAQIAGFSLANSFFND
STSEKSPQPPTPTLLSDEISQQERRAVRQAQADTFQHYPQLPAKEGAIAVIGGGIASTHL
ALSLAERNKTVRIFCQDESFSQQASGNKQGAVYPLLTPDNGTLSQYFQQGLLFSRRRLTS
LLREGFNIASELCGVLHTGHDERSCGRINRIISAQAWPKDIAHSVSAKEATALAGIEVDK
EGVFYPLGGWISPPEFTQAAFDKAAQIADVSALFNCNITRIEQSQGQWYLYQDSDSHSNE
VKHGPFSTLVLANGHGLTQFEQSKLLPATGFRGQVSHIPARNELAKLTTVLCSHGYLTPS
NNQLHCTGASYVKDPAHLDYCPNEQLDNLKKMQHSFENKSWVEDIDITGHSARVGVRMVT
RDHAPMLGCAPDTDVMLENYQLHQHTKASIKFWKDNPAPIHDGLFILGGLGSRGITTGPL
AAEALAAQLCGEIIPLDMATLALLNPNRMWMRKLIKGKAL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtgagacacagagtaaattcattgacccaagaacatgaagaaaaaacacta
aatagccgtatttatagtcattttaactcttttcttacacaattagctaaaatgtatcct
gaaaaaaataagttatcgatagggcaaattggactctgtgatgcacagcaactgatatcg
gtcatcttactgcaacaaaaatccatggcggatactcgcttgcatatgcagattttcgaa
tctgacttatcggccgttgagcgcataaatctcgaactcacagcacttcaaactcagcat
agagagtgcaaagaactggcccataccgattcagttctagactctgaattaaacctacaa
gccagctcaggttcattcgctgacaagcaagctgcaattgagcagcttatcgattcaaag
ctagttgcaataccgggctgccagagactagttttaaatcaagggcactgcctcatcgac
ctctatctcggtgatatacactcaagtttaagcaacacgcttgcccccgctgattcggca
tcttatatcgatgcatgggttcacacgtcagattcacatggactgaatgaagcgcaatta
tggcaaatggcaaagctcagcagccagacagccctgctatctagcgtgcacatgaatgag
caacaagctaacttcgcccaaatagcgggtttttccctagcaaactcattttttaatgac
tcaacatcagaaaagagccctcagcccccaacaccgactctgttaagtgatgagatttct
cagcaagagcgacgggcggtaaggcaagctcaggccgatacgtttcagcactatcctcag
ttaccagcaaaagagggcgctattgccgtcataggtggtggcattgccagcactcatctt
gcactttcccttgcagagcgaaataaaaccgtgcggattttttgccaggatgaaagcttt
agccaacaggcttcgggaaataaacaaggcgcggtctatcccctactcaccccagataat
ggcacccttagccaatattttcagcaaggcttgctgtttagccgaagacgattaaccagc
ctgctcagagaaggctttaacatagcgagtgaactgtgcggtgtgttgcatacgggccac
gatgaacgcagctgtggcagaatcaaccgaataatctcggcgcaagcctggccgaaagac
atcgcccacagtgtctccgccaaagaagccactgctctcgcaggcatagaggtcgataaa
gaaggtgttttttacccgttagggggctggataagtccgccggaatttacccaggcggca
ttcgacaaggctgcccaaattgccgatgtcagcgccttgtttaactgtaatattacccgt
atcgagcaaagccaaggtcaatggtacctgtatcaggactcagactctcattcgaatgag
gttaagcatggtcccttcagcactttagtgctggccaatggccatgggttgactcagttt
gaacaaagcaaactccttccggcaaccggattcagaggtcaagtaagtcatatcccagcc
cgcaacgagttggcaaagctcactacggttttgtgttcccacggttacctgacacccagc
aataaccagcttcattgcaccggtgccagttatgttaaagacccagctcacctggattat
tgtcctaacgagcagctggataaccttaaaaagatgcagcacagctttgaaaacaagtca
tgggtcgaagatatcgatatcacgggacacagtgccagagtcggcgtgcgtatggtcact
cgggatcatgcacccatgctgggctgcgcacccgataccgatgtaatgctagagaattac
cagctccatcaacatactaaggccagtatcaagttctggaaagataatccggccccaatt
catgatggcctgtttattttaggtggcctaggttcgaggggaataacaacaggaccactc
gctgccgaagccctcgccgctcagctgtgcggagagataataccactggatatggctaca
ttagccctacttaatcccaatcgaatgtggatgcgtaaactgattaaaggtaaggcattg
tag
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