Strongylocentrotus purpuratus (purple sea urchin): 587594
Help
Entry
587594 CDS
T01019
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spu03016
]
587594
Enzymes [BR:
spu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
587594
Transfer RNA biogenesis [BR:
spu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
587594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
587594
NCBI-ProteinID:
XP_011663334
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MPSASEIGIDDIEDIISAGDVTPKERYANKQDVMPKVLNRKKDRRKNGEDIKADSIIPGT
QKVFVKTWGCSHNNSDGEYMAGQLASYGYSITDDSSGADVWLLNSCTVKNPAEDHFRNEI
QKAQQQGKALVLAGCVPQGQPKAKYMQGVSVIGVQQIDRVVEVVEETVKGNTVRLFGQKK
QGGKKIGGASLDLPKIRRNPLVEILAINTGCLNQCTYCKTKHARGELGSYPPEELVARAK
QSFDEGVCEIWLTSEDTGAYGIDIGVTIVELLDQLVEVIPEGCMMRIGMTNPPYILDHLE
GIARILRHPRVYSFLHIPIQSGSDSVLMDMKREYCTADFRKIVEFLRKEVPRVTIATDII
CGFPHESEKDFEETLSLIEEFKFPSVFINQYFPRPGTPAAKWPQVPAQEKKRRTKALTVL
FKSYQTYDDKVGERFDVLVTEVSHDKQYLVAHNKFYDQVLVPHNKEYLGRILKVEIDSVG
KHFLMGRVLDVGPARSIPVQNQQAGSIHRASAKLSSRESSSPIKAPLPWVSIIMAVLIAV
AFLDVCRIAYQHLTR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgctagtgagattggaattgatgacattgaagacatcatatcagctggggat
gtcacaccgaaggaacgctatgctaacaaacaagatgtgatgcccaaagttttaaatcgg
aagaaggacagaagaaaaaacggggaagacattaaagcagacagcattatcccagggact
cagaaagtctttgtgaagacatggggatgctctcataataattctgatggagagtacatg
gcaggtcagctagcaagctatgggtattctattactgacgattcaagcggggcagacgtc
tggctgctcaacagctgtacggtcaagaacccggccgaggatcacttcaggaatgagatc
cagaaggcccagcagcagggcaaggcactggtcctagctggttgcgtaccccagggccag
cccaaggccaagtacatgcaaggcgtcagtgtcatcggggtgcagcagatagacagggtg
gtggaagttgtggaggagactgtaaaagggaatacagtgagattatttggacagaagaag
cagggaggaaagaagattggtggagctagtttagacctgcctaagattaggagaaacccg
cttgtggaaatccttgcaatcaatacaggctgcctaaaccagtgcacctattgcaagacg
aaacatgcacggggagaacttggtagttatccaccagaagaacttgttgccagagcgaaa
cagtcttttgatgagggcgtatgtgagatttggctgaccagtgaagacacaggggcatat
ggtatcgatattggagtgaccattgtggaactcttagaccagctggtagaggtcatccct
gagggatgcatgatgagaataggcatgaccaatccgccttacatccttgaccatttagag
ggcattgccaggatactgcgtcaccctagggtttactccttccttcacattccaatccaa
tcgggttcagattcagttcttatggacatgaagagagagtactgtactgctgacttcagg
aaaattgtagagttcctcagaaaagaagtgcctcgtgttaccatagcaacagacattata
tgcggatttccacatgagagtgaaaaggactttgaggaaactctgagtttgatagaggag
ttcaaattccccagtgtcttcatcaatcagtacttccctcgtccaggtacaccagcagcc
aagtggcctcaagtcccagcgcaagagaaaaagcgtcggaccaaagctctgacggtactg
ttcaagagctaccagacatacgatgacaaggtgggcgagaggtttgatgttcttgtcaca
gaggtgtcacatgacaagcagtatctagtagctcataacaagttttatgaccaggtgctg
gtgcctcataacaaggagtatctgggtaggatattgaaagtagagatagattcggttgga
aagcatttcttgatgggtagagttctggatgtcgggcctgctcgaagtatccctgtacag
aaccaacaagcaggatcaatacacagagcttcagcgaagctgtcttccagagaatcatca
tcaccaatcaaagcacctttgccctgggtatcaatcatcatggctgttcttattgcagtt
gccttcctggatgtgtgcaggatagcgtatcagcatctcacaagatag
DBGET
integrated database retrieval system
