Streptomyces fodineus: BFF78_22735
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Entry
BFF78_22735 CDS
T05140
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
spun
Streptomyces fodineus
Pathway
spun00190
Oxidative phosphorylation
spun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BFF78_22735
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFF78_22735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spun03019
]
BFF78_22735
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BFF78_22735
Messenger RNA biogenesis [BR:
spun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BFF78_22735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AOR33501
UniProt:
A0A1D7YD71
LinkDB
All DBs
Position
complement(5344799..5347033)
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AA seq
744 aa
AA seq
DB search
MSQQDAQAPVQHAQPPVGSLAAHRPRTVAAAASSDLAPDLDADLDTYEEAQAEGAPLPQG
RFLDRERSWLGFNERVLELAEDPNTPLLERANFLAIFASNLDEFFMVRVAGLKRRIATGV
ATRSASGLQPREVLEMIWARSRELMARHAACYHEDVAPALAEEGIHLVRWSELTDKEQAR
LFTLFRHQIFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVSGHKHFARVKVPPLLSRF
LESSPGRYVPVEDVIAAHLEELFPGMEVLEHHTFRLTRNEDLEVEEDDAENLLQALEKEL
MRRRFGPPVRLEVEESVDREVLDLLVRELKISEAEVYPLPGPLDLTGLFRVHSLDRPELK
YPKFVAGTHRDLAEVESASAPDIFAALRTRDVLLHHPYDSFSTSVQAFLEQAAADPDVLA
IKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKARFDEHANIKWARKLEEAGCHVVYG
LVGLKTHCKLSLVVRQEGETLRRYSHVGTGNYHPKTARLYEDLGLLTADPQVGADLSDLF
NRLSGYSRRETYRRLLVAPKSLRDGLISRIDKEAQHHRAGRPAFIRFKVNSIVDEAVIDA
LYRASQAGVPVDVWVRGICAVRPGVAGLSDNIRVRSILGRFLEHSRVFAFGNGGEPEVWI
GSADMMHRNLDRRIEALVRVVDPAHRAALNRLLDTGMSDSTSSWHLGPDGEWIRHSTDAD
GQPLRNVQEMLIDARRRRRGTATP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcaagacgcccaggcaccggtccagcacgcccagcctcccgtgggttccctc
gccgcccaccgcccgcgcaccgtggccgcagcggcctcctccgacctggcccccgacctc
gacgccgacctcgacacgtacgaggaggcccaggccgaaggcgcacccctgccccagggc
cgcttcctcgaccgggagcgcagctggctgggcttcaacgagcgcgtcctggagctcgcc
gaggacccgaacacgccgctgctggagcgggccaacttcctcgcgatcttcgccagcaac
ctggacgagttcttcatggtccgggtcgccggcctgaagcgccgtatcgccaccggtgtg
gccacgcggtccgcctccgggctgcagccgcgtgaggtgctggagatgatctgggcccgc
tcacgcgagctcatggcccggcacgccgcctgctaccacgaggacgtcgcccccgcgctc
gcggaggagggcatccacctggtccgctggagcgagctgaccgacaaggagcaggcccgc
ctgttcacgctcttccggcaccagatcttcccggtgctcaccccgctggccgtcgacccc
gcgcaccccttcccgtacatctccggcctctccctgaacctggccgttgtcgtacgcaac
ccggtcagcggccacaagcacttcgcgcgcgtgaaagtgccgccgctgctgtcccgcttc
ctggagagcagccccggccgctacgtccccgtcgaggacgtcatcgccgcgcacctggag
gagctgttcccgggcatggaggtgctggagcaccacaccttccggctcacccgcaacgag
gacctcgaggtcgaggaggacgacgccgagaacctgctccaggccctggagaaggagctc
atgcggcgccgcttcggcccgccggtgcgcctggaggtcgaggagtccgtcgaccgcgag
gtgctggacctgctggtccgcgagctgaagatctccgaggccgaggtgtacccgctgccc
ggcccgctggacctcaccggcctgttccgcgtccactccctggaccggccggagctgaag
tacccgaagttcgtcgccggcacccaccgcgacctcgcggaggtggagtcggcgtccgcg
ccggacatcttcgcggccctgcgcacccgggacgtgctcctgcaccacccgtacgacagc
ttctccacctcggtccaggccttcctggagcaggcggcggccgacccggacgtcctcgcg
atcaagcagaccctgtaccgcacctccggcgactccccgatagtcgacgcgctcatagac
gccgccgagtccggcaagcaggtcctcgtcctggtcgagatcaaggcccgcttcgacgag
cacgccaacatcaagtgggcacgcaagctggaggaggcgggctgccatgtcgtctacggc
ctggtcggcctgaagacgcactgcaagctgtccctggtggtccgccaggagggcgagacc
ctgcgccgctacagccacgtcggcacgggcaactaccacccgaagacggcgcgcctgtac
gaggacctcggcctgctcacggccgacccgcaggtcggcgcggacctctccgacctgttc
aaccgcctgtccggctactcgcgccgcgagacctaccgccgcctgctggtggcccccaag
tccctgcgcgacggcctgatctcgcggatcgacaaggaagcccagcaccaccgcgcaggc
cgtcctgccttcatccggttcaaggtcaactcgatcgtcgacgaggcggtcatcgacgcc
ctctaccgcgcgtcccaggccggcgtgccggtggacgtgtgggtgcgcggcatatgcgcg
gtccgtcccggtgtcgccggtctgtccgacaacatccgggtccgctcgatcctcggccgc
ttcctggagcactcccgtgtgttcgccttcggcaacggcggcgagcccgaggtgtggatc
ggcagcgccgacatgatgcaccgcaacctcgaccgccggatagaggccctggtccgcgtc
gtcgacccggcccaccgggcggccctcaaccggctgctcgacaccggcatgtccgactcg
acctcctcctggcacctcggcccggacggcgagtggatccggcactcgaccgacgcggac
ggacagcccctgcgcaacgtccaggagatgctcatagacgcccggaggcgccggcgtggc
acagcgacaccttga
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