Sphingobium sp. YG1: YGS_C1P2873
Help
Entry
YGS_C1P2873 CDS
T05858
Name
(GenBank) lysyl-tRNA synthetase, class I
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YGS_C1P2873
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spyg01007
]
YGS_C1P2873
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spyg03016
]
YGS_C1P2873
Enzymes [BR:
spyg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
YGS_C1P2873
Amino acid related enzymes [BR:
spyg01007
]
Aminoacyl-tRNA synthetase
Class I (A)
YGS_C1P2873
Transfer RNA biogenesis [BR:
spyg03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
YGS_C1P2873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
BBD01618
UniProt:
A0A2Z6AHX2
LinkDB
All DBs
Position
1:3071215..3072789
Genome browser
AA seq
524 aa
AA seq
DB search
MSDILRTAATASKAWPYEEARKLLKRYANGAPDKGHILFETGYGPSGLPHIGTFNEVLRT
TMVRNAFHALSDIPTRLVAFSDDLDGFRKVPDNVPNQAMLSEYLGKPLTQVPDPFEKFES
FAHHNNAMLRDFLDGYGFEYEFVSATQQYQAGAFDDALRQVLRRYQAIMDIMLPTLRKER
QATYSPVLPISPKSGIVLQVPVEVIDAEAGIVRFVDEGDTIEQSILGGAAKLQWKVDWAM
RWYALGVDYEMAGKDLIDSVTQSSKICRALGGRPPEGFNYEMFLDEKGEKISKSKGNGLS
LEQWLTYGPQESLAFYAYREPKKAKQLHMGVIPRAVDEYWQFRGNYSKQAIEQQLGNPVH
HIHDGKLPDGELPVTFGLLLNLVGVMGDASPEQVWGYLQNYVPGASAQTYPELDALIGHA
LAYHRDFVAPTLQRRAPEAHEAAALRKLDEELAALPADATAEDVQNIVYAIGKDEAFGFG
ELRDWFKALYQTLLGADQGPRMGSFIALYGVENSRKLIAQALAA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatcctgcgcactgccgcgaccgcatccaaggcctggccctatgaagaagcg
cgcaagcttctgaaacgttacgcgaatggcgcgccggacaaggggcatatcctgttcgaa
accggctatggcccgtcgggcctgccgcatatcggcacgttcaacgaagtgctgcgcacc
accatggtccgtaacgccttccacgcgctgtcggatattccgacccggctggtggcgttc
agcgacgatctggacggcttccgcaaggtgcccgacaatgtccccaatcaggcgatgctc
agcgaatatctgggcaagccgctgacgcaggtgcccgaccccttcgaaaagttcgaaagc
tttgcccatcacaataatgcgatgctgcgcgactttctcgacggctatggcttcgagtat
gaatttgtgtcggcaacgcagcaatatcaggccggcgccttcgacgatgcgctgcggcag
gtgctgcgccgttatcaggcgatcatggacatcatgttgccgaccctgcgcaaggaacgt
caggcgacctattcgcccgtcctgccgatttcgcccaagagcggcatcgtgcttcaggtg
ccggtcgaggtgatcgacgcggaagccggcatcgtccgcttcgtcgatgaaggcgacacg
atcgaacaatcgatcctgggcggcgcggccaagctgcaatggaaggtcgactgggcgatg
cgctggtatgcgctgggcgtcgattatgaaatggcgggcaaggatctgatcgattcggtc
acgcaatcgtcgaagatctgtcgtgcgctgggcggccgtccgcccgaaggcttcaattac
gagatgttcctcgacgaaaagggcgagaagatctcaaagtccaagggcaacggcctcagc
ctggaacagtggctgacctatggcccgcaggaaagcctggctttctacgcctatcgcgaa
ccgaaaaaggccaagcagttgcacatgggcgtcatcccgcgcgcggtggatgaatattgg
cagtttcgcggcaattattccaagcaggcgatcgagcagcagctgggcaacccggtccat
catatccatgatggcaagctgcccgacggcgaactgccggtaaccttcggtctgttgctc
aacctggtcggcgtgatgggcgatgccagccccgaacaggtgtggggctatctccaaaat
tatgtgccgggcgccagcgcgcaaacctatcccgaactggatgcgctgatcggccatgcg
ctggcctatcatcgcgatttcgtggcgcccacgcttcagcgccgcgcgccagaggcccat
gaagccgccgcgttgcgcaagctggacgaggaactggccgcattgccggccgatgcgacc
gcggaagacgtccagaatatcgtgtacgccatcggcaaggatgaggcgttcggctttggc
gaactgcgcgactggttcaaggcgctgtaccagacgctgctgggtgccgatcaggggccg
cgcatgggcagcttcattgcgctctacggggtggaaaacagccgcaagctgatcgcgcag
gcgctggcggcctga
DBGET
integrated database retrieval system
