Sphingomonas qomolangmaensis: NMP03_04955
Help
Entry
NMP03_04955 CDS
T08594
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sqo03009
]
NMP03_04955 (rimO)
Enzymes [BR:
sqo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NMP03_04955 (rimO)
Ribosome biogenesis [BR:
sqo03009
]
Prokaryotic type
ribosomal protein modification factors
NMP03_04955 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UUL83575
LinkDB
All DBs
Position
1043473..1044801
Genome browser
AA seq
442 aa
AA seq
DB search
MATQFPEPPRVGMVSLGCPKALVDSERILTKLRSDGYGLSQDYAGADVVLVNTCGFLDSA
KEESLEAIGEAMAANGRVIVTGCLGQEAEMIRARFPNVLAISGAHQYEAVVGAVHDHAPM
PPNAFLNLVPESGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLASRRPDAILREAEK
LIEAGTRELLVISQDTSAYGVDIRKEPRAWKGGEVVPHMTDLARELGRLGAWVRLHYVYP
YPHVDQVIPLMAEGLVLPYLDIPFQHAAPDVLRRMRRPANEAKVLERLKTWRAICPDIAI
RSSFVVGFPGETDADFEYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDAVPEEVKEERY
ARIMERTAAISAAKLQAKIGRELDVILDAVDDEGGATGRSQADAPEIDGEVHLRDTFGRM
PGDIIRVRIEDADEHDLFGVPV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaatttcctgaaccgccccgcgtgggcatggtgtcgctcggctgtcccaag
gccttggtcgacagcgaacgcatcctcaccaagctgcgctcggacggctatggcctgtct
caggactatgccggtgccgatgtcgtgctggtcaacacctgcggcttcctcgacagcgcc
aaggaggaaagcctcgaggcgatcggcgaggcgatggcggccaatggccgcgtgatcgtc
accggctgcctggggcaggaggccgagatgatccgcgcgcgcttccccaacgtgctggcg
atcagcggcgcgcaccagtacgaagccgtcgtcggcgcggtccatgatcacgcgccgatg
ccgcccaacgccttcctcaacctggtgcccgaaagcggcctcaagctgacgccgcgccat
tacagctatctgaagatttcggagggctgcaaccaccgctgctcgttctgcatcattccg
tcgatccgcggcgatctggccagccgccgccccgacgcgatcctgcgcgaggccgaaaag
ctgatcgaagcggggacgcgcgagttgctggtcatcagccaggacacctcggcttacggt
gtcgacatccgcaaggaaccgcgcgcctggaagggcggcgaggtcgtgccgcacatgacc
gatctggcgcgcgaactcggccgcctgggggcttgggtccggctgcattatgtctacccc
tatccgcatgtcgaccaggtcatcccgctgatggccgaggggctggtgcttccctatctc
gacatccccttccagcacgccgcgcccgacgtgcttcgccggatgcgccgtcccgccaat
gaggccaaggtgctcgagcggctcaagacctggcgcgcgatctgccccgacatcgcgatc
cgatcgtcgttcgtcgtcggcttcccgggcgagaccgacgccgatttcgaatatctgctc
gactggctcgatgaggcccagctcgaccgcgtcggtgcgttccgcttcgaacccgtcgag
ggtgccgccgccaatgcgctgcccgatgccgtacccgaggaggtgaaggaagaacgctac
gcgcgcatcatggagcgcaccgccgcgatctcggcggccaagctccaggccaagatcggc
cgcgagctagacgtcatcctcgacgcggtcgacgacgaaggcggcgcgactggccgctcg
caagccgacgcgcccgagatcgacggcgaagtccatctgcgcgacaccttcggccgcatg
cccggcgacatcatccgcgtgcggatcgaggacgccgacgagcatgatctgtttggggtg
ccggtttaa
DBGET
integrated database retrieval system
