Serratia quinivorans: E4343_11055
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Entry
E4343_11055 CDS
T05941
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
squ
Serratia quinivorans
Pathway
squ00730
Thiamine metabolism
squ01100
Metabolic pathways
squ01240
Biosynthesis of cofactors
squ04122
Sulfur relay system
Module
squ_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
E4343_11055 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
E4343_11055 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
squ03016
]
E4343_11055 (thiI)
Enzymes [BR:
squ01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
E4343_11055 (thiI)
Transfer RNA biogenesis [BR:
squ03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
E4343_11055 (thiI)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QBX66687
LinkDB
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Position
complement(2363524..2364972)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILSTSIRNVLKQYDETLAVVRHWDHIEVRAKDENQR
PVIADALTRIPGIHHILEVEDRDYTDIHHIFEQTLEAYREQLEGKTFCVRVKRRGKQDFN
SQDVERYVGGGLNQHIESARVKLSHPQVTVNLEIENDKLMLVKARREGIGGYPVGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFASSHKVRFI
AIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKVAREIGTEDFAKTMPEYCGVISKSPTVKAIKAKI
EEEEGHFDFSILDRVVSEAKNVDIRTIAEQTQEQVTEVETVAEFDADQVILDIRSNDEQE
DKPLKLDQIEVKPLPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgcttg
cgctttatcaagatcctctcgaccagtattcgcaacgtcctgaagcagtatgatgaaaca
ctggcggttgtccgtcactgggatcatatcgaagttcgcgccaaagatgaaaaccagcgg
ccggtgattgccgacgcgctgacgcgcattcccggtatccaccacattctggaagtggaa
gaccgcgactataccgatatccaccatattttcgagcagacgctggaagcctaccgcgag
caactggaaggcaagaccttctgtgtacgcgttaagcgtcgcggcaagcaggacttcaat
tcgcaggacgtggagcgttacgtcggtggtggtctgaaccagcatattgaaagcgcgcgc
gttaagctgtcgcatccgcaggtgacggttaacctggaaatcgaaaacgacaagctgatg
ctggtgaaagcccgccgtgaaggcatcggcggctacccggtaggcacccaggaagacgtg
ctgtcgctgatttccggtggtttcgactcgggtgtttccagctatatgctgatgcgccgc
ggttgccgcgtgcattattgcttcttcaatctgggtggcgcggcgcatgaaattggcgtg
cgccaggtagctcactacctgtggaaccgctttgccagttcgcacaaggtgcgctttatc
gctatcgattttgaacctgtggttggcgagatcctggaaaaggtcgaagacggccagatg
ggcgtggtgctcaagcgcatgatggtgcgtgccgcttcgcagattgccgagcgttatggc
gtgcaggcattggtgaccggtgaagcgctggggcaggtatccagccagacgctgactaac
ctgcgcctgatcgacaacgcgtctgatacgctgatcctgcgtccgctgatctcccacgat
aaagagcacatcatcaaagtggcgcgtgagatcggcaccgaggacttcgccaagaccatg
ccggaatactgcggtgtgatctcgaaaagcccgacggtgaaggcgattaaagccaagatc
gaagaagaagaagggcactttgatttcagcattcttgaccgtgtggttagcgaagccaag
aacgtggatattcgcaccatcgccgagcagactcaggagcaggttaccgaagtcgaaacc
gtggcggagttcgatgctgaccaggtgattctggatattcgttctaacgacgagcaggaa
gataaaccgctgaagctggatcagattgaggtgaaaccgctgccgttctacaagctcagc
acccagtttggcgacttggatcagagcaaaacctacctgctgtactgtgaacgtggcgta
atgagccgcctgcaggcgctgtacctgctggagcaaggcttcaccaatgttaaggtttac
cgcccataa
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