Serratia quinivorans: E4343_16680
Help
Entry
E4343_16680 CDS
T05941
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
squ
Serratia quinivorans
Pathway
squ00540
Lipopolysaccharide biosynthesis
squ01100
Metabolic pathways
squ01250
Biosynthesis of nucleotide sugars
Module
squ_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E4343_16680 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
squ01005
]
E4343_16680 (rfaD)
Enzymes [BR:
squ01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E4343_16680 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
squ01005
]
Core region
E4343_16680 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QBX67704
LinkDB
All DBs
Position
complement(3551868..3552797)
Genome browser
AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNDTGYRDILVVDNLKDGTKFANLVDLDIADYIDKEDFIANI
IAGDDLGEIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDLLHYCLEREIPFLYASSAATY
GGREEFIEERQFEAPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGSM
ASVAFHLNGQINRGENPKLFDGSQDFKRDFIYVGDVAAVNLWFLKSGVSGIFNCGTGRAE
TFQAVADAVVDFHQKGAVENIPFPEKLKGRYQAFTQADLTKLRTAGYDAPFKTVAEGVKE
YMAWLNRTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggtggcgccggcatgatcggcagcaatatcattaaggcgctgaat
gacacagggtatcgcgatatcctggtggtagataacctgaaagacggcaccaaattcgcc
aacctggtcgatctcgatatcgccgactatatcgataaagaagatttcatcgccaacatc
attgccggtgacgatctgggcgaaatcgacgccatcttccatgagggcgcctgctcttcc
accaccgagtgggacggcaagtacatgatggacaataactatcagtactccaaagacctg
ctgcactactgcctggaacgcgagatcccgttcctgtatgcctcgtctgctgccacctac
ggcggccgcgaagaatttatcgaagagcgccaatttgaagcaccgctgaacgtctacggc
tactcaaaattcctgttcgaccaatatgtccgtgaaattctgcctgaggcagaatcacag
atctgcggcttccgttacttcaacgtctacggcccgcgcgaaggccacaaaggcagcatg
gccagcgtggcgttccacctgaacggccagatcaaccgtggcgagaacccaaaactgttc
gacggcagtcaagacttcaagcgtgacttcatctacgtcggcgacgtggcggcagtgaac
ctgtggttcttgaaaagcggcgtatccggcatcttcaactgcggcaccggccgtgcggaa
accttccaggcggtcgccgatgccgtggtcgacttccaccagaaaggtgcggtagaaaac
attccgttcccggaaaaactgaagggtcgctaccaggcattcactcaggccgacctgacc
aaactgcgcactgccggctatgacgcaccgttcaaaacggtcgccgaaggcgtgaaagag
tacatggcctggttgaaccgcaccgcttaa
DBGET
integrated database retrieval system