Sphingomonas radiodurans: LLW23_16110
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Entry
LLW23_16110 CDS
T08717
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
srad
Sphingomonas radiodurans
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srad03009
]
LLW23_16110 (rimO)
Enzymes [BR:
srad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LLW23_16110 (rimO)
Ribosome biogenesis [BR:
srad03009
]
Prokaryotic type
ribosomal protein modification factors
LLW23_16110 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBH16303
LinkDB
All DBs
Position
complement(3404424..3405770)
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AA seq
448 aa
AA seq
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MATRLPSPPRVGMVSLGCPKNLVDSERILTQLRADGYHMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEVIRARFPSVLAITGAHQYEQVVEAVHEAAPA
NLSPYIDLIPDAGLKLTPRHYSYLKISEGCNHRCAFCIIPSLRGDLVSRRPDAILREAEK
LVAAGTKELLVISQDTSAYGVDLRHASYPLKGGGEVRAHMTDLTRELGRIVAPVTGWVRL
HYVYPYPHVDQVIPLMADGLVLPYLDIPFQHAAPNVLRAMKRPANDAKVLSRIRRWREIC
PDIAIRSTFVVGFPGETEADFEYLLDWLDEAQLDRVGAFRFEPVEGASANFLPNPVPEEV
KEERYARIMEKTAAISAAKLQAKIGRTLDVIIDAVGEDGATGRSYADAPEIDGEVHLRDA
GHLAAGDIVRVAIEDADEHDLFGVPIGG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcgtcttccctcaccgccccgcgtgggcatggtgtcgctcggctgtccgaag
aacctcgtcgatagcgagcggatcctgacccaattgcgcgctgatggctatcacatgtcc
cccgattacgccggggcggacgtggtgctcgtcaacacctgcggctttctcgattccgcc
aaggaagagagcctggaggcgatcggcgaggcgatcgccgagaacgggcgagtcatcgtc
accggctgcatgggcaaggaggcggaggtgatccgcgcgcgcttcccgagcgtgctcgcg
atcaccggggcgcatcagtacgagcaagtcgtcgaggcggtgcatgaggctgcgccggcg
aacctgtcgccgtacatcgatctgatccccgatgccgggctgaagctgacgccgcggcac
tacagctatctcaagatttcggagggctgcaatcaccgctgcgccttctgcatcatccct
tcgttgcgcggcgacctcgtcagccggcggcccgatgcgatcctgcgcgaggcggaaaag
ctcgtcgcggccggcacgaaggaattgctggtcatcagccaggatacgtcagcttatggc
gtcgacctgcgccatgcatcctatccgttgaagggcggtggtgaggttcgtgcgcacatg
accgatctgacgcgcgaactggggcggatcgtcgccccggtaacggggtgggtgcggctg
cactacgtctatccttatccacacgtcgatcaggtgatcccgctgatggccgatgggctg
gtgctcccgtatctcgacattccgttccagcatgccgcgcccaacgtgctgcgcgcgatg
aagcggccggcgaacgatgccaaggtgctgagccgcatccggcgctggcgcgagatctgc
cccgacatcgcgatccgctcgaccttcgtcgtcggattcccgggcgagaccgaggcggat
ttcgaatatctactcgactggctcgacgaggcgcaactcgaccgtgtgggcgcgttccgc
ttcgagccggtcgaaggggcgagtgcgaacttcctgcccaacccggtgcccgaagaggtg
aaggaagagcgctacgcgcgcatcatggagaagaccgcggcgatcagcgcggcgaagctg
caggccaagatcggccgcacgctcgacgtgatcatcgacgcggtcggcgaggacggcgcg
accggaagatcgtacgccgatgcgccggagatcgacggcgaagtccatctgcgtgatgcc
gggcatctcgcggcgggcgacatcgtgcgggtggcgatcgaggacgccgacgaacacgac
ctgttcggggtgccgatcgggggctga
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