Staphylococcus ratti: LN051_03145
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Entry
LN051_03145 CDS
T08246
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
srai
Staphylococcus ratti
Pathway
srai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LN051_03145 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srai03021
]
LN051_03145 (rpoE)
03400 DNA repair and recombination proteins [BR:
srai03400
]
LN051_03145 (rpoE)
Transcription machinery [BR:
srai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LN051_03145 (rpoE)
DNA repair and recombination proteins [BR:
srai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LN051_03145 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
ORC_WH_C
Motif
Other DBs
NCBI-ProteinID:
UEX90669
LinkDB
All DBs
Position
690128..690658
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AA seq
176 aa
AA seq
DB search
MKLQDYTQEMVDEKAFIDMAYTLLTEKNETMNLYDIIDEFKQIGHYEDNQIENRVVQFYT
DLNTDGRFLSVGDNVWGLRDWYSVDDIEEKIAPTIQKFEILDEDDEEDKNLKLLGEDDND
GDDNIPNATDDQEGLNDPEDEHVEDEIEESDLVVEEDDEDLDEEYEDDEDILEEEE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaagattacacacaagaaatggttgacgaaaaagcgtttattgatatggct
tatacgctattaacagaaaaaaatgaaacgatgaatctttatgatattatcgatgaattt
aaacaaattgggcattatgaagataatcaaattgaaaatcgcgttgttcaattttacaca
gatttaaatacagatggtagatttttaagtgttggagataatgtttggggattacgcgat
tggtactctgtagatgatatcgaagaaaaaatcgcaccgactatccaaaagtttgaaatt
cttgatgaagatgatgaagaagataaaaacttaaaattacttggtgaagacgacaatgat
ggtgacgacaacattccaaacgccactgatgatcaagaaggattaaatgatccagaagat
gaacatgttgaagacgaaatcgaagagtctgatttagttgttgaagaagacgacgaggat
ttagatgaagaatatgaagacgatgaagatattttagaagaggaagaataa
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