Salpingoeca rosetta: PTSG_02512
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Entry
PTSG_02512 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K09291
nucleoprotein TPR
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_02512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_02512
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_02512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
16077596
NCBI-ProteinID:
XP_004997004
UniProt:
F2U2E8
LinkDB
All DBs
Position
Unknown
AA seq
2322 aa
AA seq
DB search
MLDNVQAAAQCSDEDWQQLMDQEVARLAFERISSKLDGQEQEINSLKEALAEKENAMLIS
EQKFVELEERAAQQEAKLQSHTAVEATLKEVAAKHEKAAKECQDRVAELEQVLDKARSDA
NNFSNKIDELQEDCSKLVEQKQRKQREIDELAEDNKRLFDKNIELQRELEKAQSSVEDVQ
GQEKAQQLREGRLTQEVELLHQQNKSLTEQVEELSTKLLQQSREHSSTSLSLQQELDAAR
AEVNALREAKKSQETRVGHLEKQAATASQELLDLRNEMADLEQHSQREITNLNKLVGLHK
EVAADAQAKVDELSASLASLRTLLRDAQAETETVRQERVHEIEELRKAVRSLEEQNSNIK
AELANANDLLRKSKVVEEDPASMLSPSAAVASTALKEGMSLTEMWTELVNTRKALMVERQ
EVTRLEEFLQQILQDVEAKAPLFQRQKAELEQCELAKRQLTASLEESHREYEQLETAWRK
EQSRATRLQSVNQRMEGTVADLSAQIQQLLARITELSGGTVTTEPLAAEDAAQQSMDSLN
ADLVAVDSIRTLQEQNVKLMLKVRELSDQNTQEAERARAAANEELEKQLQDALENLQELR
QARERHQHTVDALTKQRDMFKALYSEACLAVGKDPETTTRLIMSPSQQQRQQQQQRQQQQ
QRTPSHASVPTTPAGTGGAGSSMLHTPPSRGADNSRLLRELQADFEAYRKERQETDRMLN
EELEKARQQASDARMENAKLSAHNDYLGDRYKDLESSVNALRAENKRLLDKSTQSANLLV
EAQTKLQAAQTRAAEAEDNLRRLQIQHDSMKERVSMLEGSEARLRQENDYLLAERKSQNT
LLKSLQMLQQEMKRSEEDLKRSFSSKNEQLEQENTLAKKQLEEVRQQHSASIARVNAELE
QARQAISNEKTAHQATREELISVKGQLEAMEKELQSKQKQLENAESRLDLMLAGQAKEAQ
DDSSDKTLSEQLKATMDQLKQAQAELKAANESVAQYKAISAASEAAYKDLSDNTEQLKKE
MTARQTKYEADVKTLQAEIEEHERRNAELHEKLEQVEQDLLTARKESTLKLSEAEAKLAA
AEKAEADARSHEAEAVAHSKKQQELLKEASQKYEVEMLNHAKDVDELRRVRAQLEETQQQ
HANVKAELETAKGEAATAKAALEEQRKHLTEDIERLTTRLQDTEAQNKTLHSHIDEMNAK
LTSLQHSRLSADDSIAGKEEAASASGDSASSQELWDIVRHHRNRAEIFETECEQLKLEIN
RLTQQIGHLQKQLAQTREQLNAQRERSNEQALTAAQHRELMEKVEKLNLLEDSNKLLREQ
LNESDQKRQESEKKLLQAELRLNPLQKRVQELEREAVVLREEKRNAEKSEQTCQRRIQAI
LNMYNSVDPEQIKSLQEKETMWESTRALLEQEIRDLKAEQTKKEEEHKAETAAIQEKYDK
LLEQFRRLQSVSRRIRQEQQANTKEKEALQAKVAAAEQRLAQTKETLEADLAKAREELEV
SRKATADAIKEADSGARWQQLRGRFSQLATKAKTLASERTKFKEAADTAQAQVQELTEKL
KTSQEAVAKAETRARMLQRQVEQLKKQLAASTAPSTAPATPAAPAPATTAPATPATTGAA
AAAAAARRRKSSASASAKASAVGTPAAGTAAAKKRRASSTGEDASAAAGTGGVAAKQAKL
KQAPTPTTAAAAQPRPVRKASEVHVDTPMPKRAQQGKRAKPTKPVAMPSFEEEGAGELAA
KKSKLAAALAREKAAAAKAKEEESKKEEAHKEQAAKQPSPQAEEEEVVKMGEDVVTVEEE
ESAAPPAAAEEEAEEQPEPTTPVVEEVAASEGVPEAAPAAQEEEPEVEEVESAEEGEAEQ
PAEAAAPALEEVEEVETGEQAQPEEEKEAEATAEAGEEVTEEAEGAAVAQEEEEQEEQEE
ESEDQQGAMMAGELEALEEEAEEEEEHEPSLAEELAEAAGEEAMEGALHDQQDAATAGAA
EQEQEQQDEGEEETAAGEEQQEEGEGVVEEGAEDETAPAADGEAVEQEEDEEEGEAEPQM
AEGEEPAEEAGEAMDEGDEEAAGVAEDEEEEAGGQEEAETGMPEDEGEDDTEGAAVTEEG
GEAGQDYPEEEGEGEEQGGEEEEEEAGMGMEEEEDEGAGEEDEAMEEGETAEEGEAGAQE
AQEPEEGLTDVLDIEEQHDFGEDEGGDDDASATGTAGDNDDGDDNDDDAGDDATQEGEGE
EGAGDGDNGDDDDDNDATDGAASAAATTPAKTTSATPATPATTGRTYRVRNPIVMTPQPE
QQQRPSSAPAGAQRGSRGRGRGGRAGRRGHGRRFKRRGQGRQ
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaacgtgcaggccgctgcgcaatgcagcgatgaggactggcagcaactgatg
gaccaagaggttgcgcgcttggcattcgagcgcatctcctcgaagctcgacggtcaggag
caggaaatcaacagcctcaaggaggcgcttgccgagaaggagaacgccatgctcatcagc
gagcaaaagttcgttgagctggaagagcgtgcagcacaacaagaagcaaagcttcagtcg
cacacggcagtcgaagccacattgaaggaagtcgccgcaaaacacgaaaaggccgcgaaa
gaatgccaggaccgtgtggctgagctggaacaggtgcttgacaaggcccggtcggacgcc
aacaacttctcgaacaaaattgacgagctgcaagaggactgctccaagcttgtagagcag
aagcagcgcaagcagcgcgaaatcgatgagctggctgaggacaacaagcgcctctttgac
aagaacattgagctgcagcgcgaactggagaaggcacaaagcagcgtggaggatgtgcaa
ggacaggaaaaggcacagcagttgcgcgagggtcggctgacgcaggaggtggagctgctc
caccagcagaacaagagcttgacggagcaagtggaggaactgtccacaaagctgctccag
caatcacgcgagcactcgtcgacctcgctgtcgttgcagcaggagcttgacgctgcccgg
gcggaggtgaacgccctgcgcgaggcaaagaagagtcaggagacgcgcgtgggccatctc
gagaagcaggcggcaaccgcgagccaggagctgctggatctgcgcaacgagatggcagac
ctcgagcagcactcgcagcgcgagattacaaacctcaacaagctggttggtttgcacaag
gaggttgccgcagacgcccaggcaaaggttgacgagctgagcgcatcgcttgcgtcactg
cgcacgctgctgcgcgacgcccaggccgagacggagacggtgcggcaggagcgcgtgcac
gagattgaggagctgcgcaaggccgtgcgctccctcgaggagcagaacagcaacatcaag
gccgagcttgcgaacgcaaacgacctgctgcgcaagagcaaggtggtggaggaggacccg
gccagcatgctgtcgccatccgccgccgtggccagcaccgcgctcaaggagggcatgtca
ctcacggagatgtggaccgagctcgtcaacacgcgcaaggcgctcatggttgagcggcag
gaggtgacgcgcctggaggagttcctgcagcagattctgcaggacgtggaggccaaggcg
ccgctgttccaacggcaaaaggcggagctggagcagtgcgagctggccaagcggcagctg
acagcgagcctggaggagagccaccgggagtacgagcagctggagaccgcatggcgcaag
gagcagtcccgcgcaacgcggctgcagagcgtgaaccagcgcatggagggcaccgtggca
gacctgtctgcgcagatccagcagctgcttgcgcgcatcacggagctgagcggcgggacg
gtgaccacagagccgctcgccgcagaggacgcggcgcagcagagcatggactcgctcaac
gcagacctggtcgccgtggacagcatccgcaccctgcaggagcagaacgtcaagctcatg
ctcaaggtgcgcgagctgagcgaccagaacacgcaggaggccgagcgggcgcgggcagca
gcaaacgaggagctggagaagcagctgcaggatgcgctggaaaacctgcaggagctgcgc
caggcccgcgagcgccaccagcacacggtcgacgccctcaccaagcagcgcgacatgttc
aaggcgctgtactcggaggcgtgccttgctgtgggcaaggacccggaaaccaccacccgc
ctcatcatgtcgccctctcaacagcagcgacagcaacagcagcagcggcaacagcaacag
cagcgcacaccatcgcacgcgtctgtgccgacgacacccgcgggcacaggcggtgctggc
tcgagcatgctgcacacgccgccatcgcgcggcgcagacaacagccggctgctgcgggag
ttgcaggctgactttgaggcgtacaggaaggaacggcaggagacggaccgcatgctcaac
gaggagctggagaaggcgcggcagcaggcctccgacgcccgcatggagaacgcaaagctc
agcgcccacaacgactacctcggcgaccggtacaaggaccttgagtcctctgtcaatgcg
ctgcgggcggagaacaagcggctgctggacaagtcgacgcagtcggccaatctgcttgtt
gaggcgcagacgaagctgcaggcggcccaaacgcgcgccgcagaggcagaggacaacctg
cgccgcctccagatccaacacgactcgatgaaggagcgggtgtcaatgcttgagggcagc
gaggcgcgtctgcgccaggagaacgactacctgctggccgagcggaagagccaaaacacg
ctcctcaagagcctgcagatgctgcagcaggaaatgaagcgctcggaggaagacttgaag
cgaagcttttcgtcgaagaacgagcagcttgagcaggagaacacgcttgcgaagaagcag
ctggaggaagtgcgacagcagcacagcgccagcattgcccgcgtcaacgctgagcttgag
caggcgcgccaggccatctccaacgagaagaccgcccaccaagccacacgcgaggagctg
atctcagtcaagggccagctggaggcgatggagaaggagctgcaatcgaagcagaagcag
ctcgaaaacgccgagagcaggctcgacctcatgctggccgggcaagcaaaggaagcgcag
gacgacagcagcgacaagacgctctccgaacagctcaaggcgacgatggaccagctgaag
caggcgcaagccgagctaaaggccgccaacgaatccgttgcccagtacaaggccatcagc
gccgcaagcgaggcagcctacaaggacctctcagataacaccgagcagctcaagaaggag
atgactgcccgccaaacgaaatatgaggccgacgtcaagacactgcaggccgagattgag
gagcatgaaaggcgcaatgcagagctgcatgagaagctggagcaggttgaacaggacctg
ctcactgcgcgcaaggagagcacgctcaagctgtctgaggctgaggccaagcttgcagcg
gcagagaaggccgaggcagacgcccgcagccacgaggctgaggccgtcgctcactcaaag
aaacagcaagagctgctcaaggaagcatcgcaaaagtacgaggtggagatgctcaaccat
gcaaaggatgtggacgagcttcgccgcgtccgtgcccagctcgaggaaacacagcagcag
catgccaatgtcaaggctgagcttgaaacggccaagggtgaggccgcgactgcaaaggcc
gcccttgaggagcagcgcaagcacttgactgaggacattgagcgcttgacaacgcgcctg
caggacacggaggcgcagaacaagacgctccactcgcacattgacgagatgaacgccaag
ctcacgtccctccagcactcccgcctcagcgccgatgactcgattgccggtaaggaggag
gctgcgtctgcgtcgggcgactctgcttcatcgcaggagctgtgggacattgtgcggcac
caccgcaaccgcgcggagatcttcgagacagagtgcgagcagctgaagctcgagatcaac
cgcctcacgcagcagattgggcacctgcagaagcagctggcacagaccagggagcagctg
aatgcacagcgcgagcgcagcaacgaacaagctctcaccgcagcacagcaccgcgagctc
atggagaaggtggagaagctgaacctgttggaggacagcaacaagttgctgcgcgagcag
ctcaacgagtccgaccagaagcgccaggagtcggagaagaagctgctgcaggccgagctc
cgcctcaatccgctgcagaagcgcgtgcaagagctggagcgggaggccgtcgtgctgcgc
gaggaaaagcgaaacgccgaaaagtccgagcagacctgccagcgccgtatccaggctatc
ctcaacatgtacaactccgttgacccagagcaaatcaagtcgctgcaggagaaggagacc
atgtgggagtcgactcgtgctcttctcgagcaagaaatcagagacctcaaggccgagcag
acgaagaaagaggaagagcacaaggctgagacagcggccattcaggagaaatacgacaag
ctcctggagcaattccggcgactgcagtcggtgtcgcggcgcatccgccaggagcagcag
gccaacaccaaggagaaggaggccctgcaggcgaaggttgcggccgcagagcagcggctg
gcgcagaccaaggagacacttgaggccgaccttgcaaaggcgcgggaggaactcgaggtc
tctcgcaaggccacggccgacgccatcaaggaggcagacagtggcgcccgctggcagcag
cttcgtggcagattcagccagctggcgacaaaggcaaagacgctggccagcgagcgcacc
aagtttaaggaggcggcagacacggcgcaggcgcaggtgcaggagctgacggagaagctc
aagacctcccaggaggcagtggcaaaggcagagacgcgcgcaaggatgcttcagcgtcag
gtggagcagctgaagaagcagcttgcagccagcactgcgccatccacagcgccagcaacg
ccagcggcaccggcaccggcaacaacggcgcccgccacccctgctacgactggtgccgcc
gctgctgctgctgctgcgcgtcgccgcaagtcgagtgcgagtgcgagtgcaaaggcgtcg
gcggtgggcacaccggctgccggcacagcagctgcgaagaagcgccgcgcctcatcaacc
ggggaagatgcaagcgcagctgcaggcacaggtggtgttgctgccaagcaagccaagctc
aagcaggccccaacgccaacaacagcagccgcagcacagccacgcccagttcgcaaggct
tccgaggtgcacgttgatacgccaatgccaaagcgcgcacagcaaggaaaacgggccaag
cccacaaagcccgtggcgatgccgtcgtttgaggaagagggcgcgggtgaacttgctgcc
aagaagagcaagctcgcagcggcacttgcccgcgagaaggccgcagccgcaaaggcaaag
gaggaagagtcaaagaaggaagaggcacacaaggaacaagctgctaagcaaccctcgccc
caagctgaggaggaagaggttgtgaagatgggcgaggacgtggtgaccgtggaagaggag
gagtcggccgcgccaccagctgctgctgaggaagaagcagaggagcagcccgagccgacc
acgcctgttgttgaggaagtggcggcgagcgagggcgtgccagaggccgcgcccgcagcg
caagaggaggaacccgaggtggaggaggttgaatctgctgaggagggcgaagcagagcag
ccggcagaggcagctgctccagctctcgaggaggtggaagaggtggaaacaggggagcag
gcccagcccgaggaggagaaggaagcagaggcaactgcggaggcaggggaggaggtgaca
gaggaagcggagggtgcagcagttgcgcaggaggaggaggaacaggaagaacaagaagag
gaaagcgaagaccagcagggcgcgatgatggcaggcgaacttgaggctctggaagaggaa
gcagaggaggaagaagagcacgagccgtcgcttgcggaggagctggccgaggcggcaggg
gaggaggccatggagggagcgctgcacgaccagcaggacgccgcgacagcgggtgctgcc
gagcaagaacaggagcagcaggacgagggcgaagaggagacagcggcaggtgaggagcaa
caggaggagggcgagggtgtggtggaagaaggcgcagaggacgaaacagcgccagcagcg
gacggagaagcagttgagcaagaggaggatgaggaagagggtgaggccgagccgcagatg
gcagagggcgaggagccagcagaggaagcgggcgaagcgatggatgagggcgacgaggag
gccgcaggcgtggctgaagacgaagaagaggaagcaggtggccaagaggaggcggagact
ggtatgcctgaggacgagggtgaagacgacacggaaggtgccgccgtcacagaggaaggc
ggagaggcagggcaggactaccccgaggaagagggagagggcgaggagcaaggcggcgag
gaggaggaggaggaagcagggatgggcatggaggaggaagaggacgaaggtgctggtgag
gaagacgaagcgatggaggaaggtgagaccgctgaggaaggtgaggcaggcgcacaagaa
gcgcaagagcctgaggagggactcacagatgtcctcgacattgaagagcagcatgatttt
ggcgaggacgaaggcggtgatgatgatgcctcagcaacaggcaccgctggtgacaatgat
gacggcgacgacaatgatgacgatgctggcgacgatgcaacacaagaaggcgagggtgag
gagggtgctggtgatggcgacaacggtgacgatgatgatgataacgacgcaacagatgga
gcggcgagtgcagccgccaccacacctgccaagacaaccagtgccacgccagcgacgcca
gcaacaaccggaagaacgtaccgagttcgcaacccgattgtgatgacgccccaaccagag
cagcagcagcgcccgtcgtctgcaccggccggggcccagcgcgggagtcgtggccgcggg
cgcggtggccgggccggtcgccgtggacacggccgtcgcttcaagcgccgcggacagggt
cgccagtga
DBGET
integrated database retrieval system