KEGG   Salpingoeca rosetta: PTSG_03877
Entry
PTSG_03877        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
sre  Salpingoeca rosetta
Pathway
sre03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PTSG_03877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_03877
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     PTSG_03877
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 16076190
NCBI-ProteinID: XP_004995610
UniProt: F2U5N0
LinkDB
Position
Unknown
AA seq 424 aa
MADAVKVKVDTKVPSTPLLQFKHADLNVKSANKQLLFTSRRNYGKSSSSNEPLEVRAHAD
AIDYVSMPSSRYTNYMVGVRKAGTNELQLIPATLLEMTPRLSTEANQARNPTLDTPEKRQ
QARAHLVESFGGKKQKRVLHSRTRYMLSDEALETVASTMADAVTPGSSSSSSSSADGDDG
GDVEGGKGRMLPPNNLKSKDAAGVYPLDGLVLSNERAALKGMYPSFHKPKEEELTAWRGQ
NRFMPFVIDVLERDIMISAKGKQREARILALKYLAELLKFHNCAVVRRLPRKRSDLVKTL
KSTPDAVIDGFINKFLIDTDDSSSSPKLFLSKQKQHLLLMYILTIALHACKYKNLPLDAF
ATELKTPLKEVENVARALGCIVKKSTTSVDFEDSEGNPSKRAKTNTLISLKLPLVFRTRR
GRAK
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgacgctgtgaaagtgaaagtggacaccaaagtgccgtccaccccactgctgcaa
ttcaagcacgcagacctgaatgtcaagagcgccaacaagcagctcctcttcacatcgcgc
cgcaactatggcaaatcctcatcaagcaacgaacccctcgaagtgcgcgcacacgccgac
gccattgactacgtgtccatgccaagctcgcgatacacaaactacatggtcggggtacga
aaagccggcacaaacgaactgcagcttatcccagcaacgcttcttgaaatgactccacgc
ctctccactgaggcgaaccaggcgcgaaacccgacgctggacactccggagaagcggcag
caggcccgcgcacatcttgtcgagtcgtttggtggcaagaagcagaagcgcgtcctgcac
tcccgtacacgatacatgctctctgacgaagcgctggagactgtggcgtcgaccatggcc
gatgcagtgacgcccggcagcagcagcagcagcagcagcagcgccgatggcgatgatggt
ggcgatgtggagggcgggaaaggtcgcatgcttccaccgaacaacctcaagtccaaggat
gcagcaggggtgtacccgctcgatggacttgtgctgtccaacgagcgtgctgccctcaag
ggcatgtatccatctttccacaagccaaaggaggaagagcttactgcctggcgcgggcag
aacaggttcatgccgtttgtcatcgacgtcctcgaacgcgacatcatgatttccgcaaag
ggcaagcagcgcgaggccaggatcctcgccctgaagtatctcgctgagctgctcaagttc
cacaactgcgccgtcgtgcgccgcctcccgcgcaaacgcagcgacctcgtcaagaccctc
aagagcacacccgatgctgtcattgacgggttcatcaacaaattcctcattgacaccgac
gactcgtcgtcctctccaaagttgttcctgagcaaacagaagcagcacttgcttctcatg
tacatcctcactattgctctccacgcctgcaaatacaagaatctgcccctggacgccttt
gcaacggagctcaagacacccctcaaagaggttgagaatgttgcgcgtgcgctcgggtgc
atcgtgaagaagtcaaccacatccgttgatttcgaggacagtgaaggcaatccatcaaag
agggcaaagaccaacacgctgatttcgctcaagctgccgctggtgttccgcacgcgccgc
ggccgcgccaagtga

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