Salpingoeca rosetta: PTSG_05408
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Entry
PTSG_05408 CDS
T04136
Name
(RefSeq) AMP dependent ligase
KO
K15013
long-chain-fatty-acid--CoA ligase ACSBG [EC:
6.2.1.3
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00061
Fatty acid biosynthesis
sre00071
Fatty acid degradation
sre01100
Metabolic pathways
sre01212
Fatty acid metabolism
Module
sre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PTSG_05408
00071 Fatty acid degradation
PTSG_05408
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sre01004
]
PTSG_05408
Enzymes [BR:
sre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PTSG_05408
Lipid biosynthesis proteins [BR:
sre01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
PTSG_05408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
Cas_Cas2CT1978
Motif
Other DBs
NCBI-GeneID:
16074560
NCBI-ProteinID:
XP_004993982
UniProt:
F2UAC6
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MSLKHFDVTADGEVDLKITPDGAASAEPITVMQRFKETVEKVGDRPALCVSRDGAWQQWT
WRDFYEDVKMAGRAFIKLGLDAHHAVGIIGFNSPEWFIADLGAIFAGGFATGIYTTNGPE
AIEYVVNHSKTQIIVAEDKKQLDKILQVHQNFEHLKAIVLYNDTVPDVECTVPILDWDEF
MRHGADVPDFELGHRMSVQKPGQCCMLIYTSGTTGNPKGVMITHDNVTWTSATLAASLPN
MTFGKEHIVSYLPLSHIAAQILDMHAPMILGATVWFAQPTALKGTLVQTLQEVRPTVFLG
VPRVWEKIEEKMRAVGSETTGLKKKIGTWAKRKGLDGAYAIQQGRPVPSGWGVAKKLVFS
KVRKALGLDRCKFFATAAAPISKDTLEYFLSINIPIMEVYGMSENTGPQSLNIPGKHRTG
SVGLPLAGTELKIHEPDQDGNGEICFRGRHICKGYMYNEEKTRESIDAEGWLHSGDIGRV
DEDGYLYITGRIKEIIITAGGENVAPVPIENLVKENCPIISNCMLIGDRRKFLSLLVCLK
SEVDPETTAPLDELTPQTIEILEAQGSKAKTVTEAMDDEHVLKYIQAGIDEANKHAVSRA
QKVQKFKILPRDFSVPGGELGPTLKLRRPIVVKQYEELIDSFYA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaagcactttgatgtgaccgccgatggcgaggtcgatctcaagatcacgccg
gatggcgccgcctccgcggagcccatcactgtcatgcagcgcttcaaggagaccgtcgag
aaagtcggcgaccgccccgcgctgtgcgtgagccgggatggcgcgtggcagcagtggacg
tggcgcgacttctacgaggacgtcaagatggccggccgcgccttcatcaagcttggcctc
gacgcgcaccacgccgtcggcatcatcggcttcaacagccccgagtggtttatcgccgac
cttggcgccatcttcgccggcggctttgccacgggcatctacacgaccaacgggccggag
gcgattgagtatgtggtgaaccactccaagacccagatcattgttgccgaagacaagaag
cagctggataagatcctgcaggtgcaccagaactttgagcatctcaaggcgattgtgctg
tacaacgacacggtgcctgatgtggagtgcaccgtccccatcctggactgggacgagttc
atgcgccacggcgcagacgtgccggactttgaacttggccaccgcatgagtgtgcagaag
cccgggcagtgctgcatgctcatctacacgtctggcacgacgggtaaccccaaaggcgtc
atgatcacgcacgacaacgtcacgtggacgtccgccacgcttgccgcctctctgcccaac
atgacgtttggcaaggagcacattgtcagctacctcccgctgtcgcacattgctgcgcag
attctggacatgcacgcgcccatgatccttggcgcaaccgtctggtttgctcagccgact
gcgctcaagggaacgctggtgcagacgctgcaggaggtgcgcccaacggtgttccttggc
gtcccgcgcgtgtgggagaagattgaggagaagatgcgggctgttggcagcgagacgacg
ggcctgaagaagaagattggcacgtgggccaagcgcaagggtctcgatggcgcatacgcc
atccagcaggggcggcccgtgcctagcggctggggcgtcgcaaagaagcttgtgttttcg
aaggtgcgcaaggcgcttgggcttgaccggtgcaagttctttgccaccgccgccgcccca
atctcaaaggacacgctcgagtacttcctctccatcaacatcccaatcatggaggtgtat
ggcatgtccgagaacacgggcccgcagtcgctgaacattcccgggaagcaccgaacgggc
tcggtcggcctgccgctcgccggcacggagctcaagatccacgagccagaccaggacggc
aacggcgagatctgcttcaggggaaggcacatctgcaaggggtacatgtacaacgaggag
aagacacgggagtcgattgatgccgagggctggctgcactctggcgacattgggcgggtg
gacgaggacgggtacctctacatcacgggccgcatcaaggagatcatcatcaccgccggc
ggcgaaaacgttgcgcccgtccccatcgagaacctggtgaaggagaactgcccgatcatc
agcaactgcatgctgattggggaccgccgcaagttcctgtcgctgctcgtctgcctcaag
tccgaggttgacccggagacaaccgcccccctggacgagctcaccccccagaccatcgag
atcctcgaagcgcaaggctccaaggccaagactgtgacggaggcgatggacgacgagcac
gttctcaagtacattcaggccggcattgatgaggccaacaagcacgccgtctcccgcgcc
cagaaggtgcagaagttcaagatcctcccacgcgactttagcgtgcctggtggcgagctt
ggccccacgctcaagctgcgtcgccccattgtcgtgaagcagtacgaggagctcatcgac
agcttctacgcctga
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