Salpingoeca rosetta: PTSG_11319
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Entry
PTSG_11319 CDS
T04136
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00330
Arginine and proline metabolism
sre00480
Glutathione metabolism
sre01100
Metabolic pathways
sre01110
Biosynthesis of secondary metabolites
sre04148
Efferocytosis
Module
sre_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PTSG_11319
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PTSG_11319
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PTSG_11319
Enzymes [BR:
sre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PTSG_11319
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
RGS12_usC
Motif
Other DBs
NCBI-GeneID:
16068190
NCBI-ProteinID:
XP_004987678
UniProt:
F2UT23
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MKFDHAGKVQQVHPVAGMNVAARKKACREIIEANRTCGEAFFLTDLHDIWCKHRTWQAML
PRIEPFYAIKCNSDPVILKALAALNLGFDCASAKEIQAMLDLGVAPDRIIFANPCKALSH
LLYAKEKGVKLMTFDNENELLKCAEHFPSARLVLRVLADDSKAVCRLGLKYGARPSCTLR
LLQLARTLHLNVVGVSFHVGSGSTDASAFADAVYRARAVFDQALSLGFRPTLLDVGGGFP
GTTYTSAISFDAIASCLTRAVDECFPPSCGVRVIAEPGRFYVASACCLAVSVIGKRTPHE
VAGDHNNNNRRAIDTTGNGHGSSARCHDVPAAAPRVVGGCDAGDDRADAAHATPRASGMR
DMDSSATSSGSSSDSDGEDEGDEDDSVLLGATGRGTTRVECTRADGSDGTILAAKARPGE
RHNKGRERAVSMRAPRQESPPSPTTPSLSASTSCPASRPCSPTRHYQQHQVQEQEQQHDS
LEHDQDKQSLMLYVNDGVYGSFNCILFDHAVVRGEVLLSRCDVQRAPPLTCSIWGPTCDS
MDCIEKRASLPELEVGDWLFYPDMGAYTSCAASTFNGFDKPMQFYTFSADASFDATQHLP
ASFPSFVFPLLGDSGGHHAVNDHHRHHDSTAAAEMNDCRLAVAADISA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaccatgccggcaaagtgcagcaggtgcaccctgttgcgggcatgaacgtt
gccgctcgcaagaaggcatgccgtgaaatcatcgaggccaaccgcacatgcggcgaggct
ttcttcctcaccgacctgcacgacatctggtgcaagcacaggacatggcaggccatgttg
cctcgcatcgagcctttctatgccatcaagtgcaacagcgatcccgtcatcctcaaggcc
ctcgctgccctcaaccttggcttcgactgcgcctctgcaaaagagattcaggccatgctg
gacctgggcgtggccccagaccgcatcatcttcgccaacccatgcaaggccctgtcccac
ttgctctatgccaaggagaagggtgttaagctcatgacctttgacaacgagaacgagctg
ctcaaatgcgccgagcactttccctccgcacggctggtgctgcgtgtgttggcggacgac
tccaaggcggtgtgccgactgggcctcaagtacggcgcacgcccctcctgtacgctgcgg
ctgctgcagttggcacgaaccctgcacctcaatgttgtgggcgtcagctttcacgtcggc
tccggctccacagatgcgtccgcctttgccgatgccgtgtaccgcgcacgtgccgtgttt
gaccaggcgctgtccctcgggttccgcccaacgctgctcgatgttggcggcggattcccg
ggtacaacgtacaccagcgccatctcctttgatgccattgcctcgtgcctcacccgcgcc
gtggacgagtgcttcccgccgtcctgcggtgtgcgcgtgattgcagagccaggccgcttc
tacgttgcgtcggcgtgctgcctcgccgtctccgtcattggcaaacgcaccccacacgag
gtcgctggcgaccacaacaacaacaacaggcgtgccatcgacacaaccgggaatggacac
ggtagctcagcccgatgccacgatgtgcctgctgctgctcctcgtgttgtcggtggctgt
gacgctggcgatgaccgtgccgatgctgctcacgccacaccgcgcgccagcggcatgcgt
gatatggacagcagcgcgaccagcagtggcagcagcagtgacagtgatggcgaagacgaa
ggagacgaagatgatagtgtcctgctgggtgcaacgggtcgcggcacaacacgagtggag
tgcacacgcgctgacggcagcgacggcaccattcttgcagcgaaagcgcgaccaggagag
cgacacaacaagggccgcgagcgtgctgtgagcatgcgggcgccccgtcaggagtcacca
ccatcgccaacaacgccgtcactctcggcctccacctcctgcccagcatcgcgcccctgc
tcaccgactcgtcactatcagcagcaccaggtgcaggagcaggagcagcaacacgattcg
cttgagcacgaccaagacaagcagtcgctcatgctgtatgtgaatgatggggtgtacggg
tcgttcaactgcatcctgtttgaccacgcggttgtgcgtggagaggtgctgctgagccgg
tgcgatgtgcagcgcgccccgccgctcacctgcagtatctgggggccgacctgcgactcc
atggactgcattgagaagcgtgcttccctgccggagctggaggttggcgactggctcttc
taccccgatatgggcgcatacacgtcgtgcgctgccagcaccttcaacggctttgacaag
cccatgcagttctacacgttcagcgcggacgcgagctttgatgcgacgcagcacctgccc
gcctcgtttccgtcctttgtgttcccgctgcttggtgacagtggtggtcatcatgctgtc
aacgatcaccatcgtcatcacgactccaccgcagcagcagagatgaacgactgccgcctc
gctgtcgcggccgatatcagcgcgtga
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