Sediminicoccus rosea: LHU95_03880
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Entry
LHU95_03880 CDS
T08103
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
srf
Sediminicoccus rosea
Pathway
srf00020
Citrate cycle (TCA cycle)
srf00785
Lipoic acid metabolism
srf01100
Metabolic pathways
srf01110
Biosynthesis of secondary metabolites
srf01120
Microbial metabolism in diverse environments
srf01200
Carbon metabolism
srf01210
2-Oxocarboxylic acid metabolism
Module
srf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LHU95_03880
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LHU95_03880
Enzymes [BR:
srf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LHU95_03880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
COQ9
Motif
Other DBs
NCBI-ProteinID:
UPY37845
UniProt:
A0A9E7DAZ6
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All DBs
Position
890585..893476
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AA seq
963 aa
AA seq
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MAGVDILASAMNGANAAYLADTYARWVENPGAVDASFAELFAALNDDARAVLTDAMGASW
APRPRGGFAPPEDAKSAAKPTAGAARPNDGRATDPEETRRAVLDSIRALMLIRSYRVRGH
LEARLDPLGLQVPPQHPELSAPFWGFTESDLDRRIFIDNVLGLETATVREIMQRVRATYC
GPIGVEFMHIQDPDQKSWIQQRVEGAPWVTGFSPAEKRQILLQLTEAEGFESFCAKKYVG
TKRFGLEGGESTIPAVQTVIETAAREGVKEIAIGMAHRGRLNVLVNVVKKPYMQVFAEFK
GSSFKPDDVQGSGDVKYHLGTSTDVEIEGKPVHLSLQPNPSHLEAVNPVVAGKVRARQDM
SGDVKTRSSVMGILLHGDAAFAGQGLVYETLAMSQLIGYRTGGTIHIVTNNQIGFTTVPA
HAYSGLYCTDVAKAIQAPILHVNGDDPEAVVWCARLCAEFRMRFQADIVLDIVCYRRHGH
NESDEPAFTQPTMYSRIRQMKTTRTLYAERLAAEGSVTAEDAQSIQDEFNARLEDAFQAA
SSFKPNKADWLEGHWSGLKAVGGTDQVEQLHDTAVTLDTLREVGGALCRVPADFNANSKI
IRQLEAKKQAIETGEGLDWATGEALAFGTLLLEGHRVRLSGEDVQRGTFSHRHCVLVDQV
DQREYAPLNNIREGQPKFEAFNSLLSEAGVLGFDYGYSLADPKTLVLWEAQFGDFANGAQ
VIIDQFIASGETKWLRMSGLVMLLPHGHEGQGPEHSSARPERYLQLCAERNMRICNFTTP
ANYFHALRRQLKANYRKPLVVMTPKSLLRHKLAISSLAEFGPGSAFRYVIPEMDAIAPEE
KVKRVVLCTGKIYYDLWQERRDKGIQDVALIRVEQLYPFPAKSLAMALAPYKNAEVVWCQ
EEPENMGAWNFVDRRIEKVLKDIGGKASRPEFVGREAAASPATGLAKVHQAQQEALVRQA
LGL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtggacatcctcgcaagcgcaatgaatggcgccaatgcggcatatctcgcc
gacacctacgcccgctgggttgagaatcccggtgcggtggacgcctccttcgctgagctt
ttcgccgcgctgaatgatgatgcccgcgccgtcctgacggatgcgatgggcgcctcctgg
gcgccgcgcccacgcggcggcttcgccccgcccgaggatgccaagtcagccgccaagccc
acggccggcgccgcccgcccgaatgatggccgcgcgaccgacccggaggagacccgccgg
gccgtgctggacagcattcgcgccctgatgctcatccgctcctaccgggtgcgcggccat
ctggaggcccggctcgatccgctcggcctgcaggtcccgccgcagcaccccgagctttcc
gcccccttctggggcttcaccgaaagcgacctcgaccggcgcatcttcattgacaacgtg
ctggggcttgagaccgcgacggtgcgcgagatcatgcaacgcgtccgcgccacctattgc
gggccgatcggcgtcgagttcatgcatatccaggatccggaccagaagtcctggatccag
cagcgcgtcgagggcgcaccctgggtcaccggcttcagcccggccgaaaagcgccagatc
ctgctgcagctgaccgaggcggagggcttcgaatccttctgcgccaagaaatatgtcggc
accaagcgcttcggcctggagggcggcgagagcaccatccccgccgtgcagaccgtgatc
gagacggcggcgcgcgaaggtgtgaaggaaatcgcgatcggcatggcccatcgcggccgc
ctcaacgtcctcgtgaatgtcgtgaagaagccctacatgcaggtcttcgccgagttcaag
ggatccagcttcaagccggatgacgtgcagggctcgggcgatgtgaagtaccacctcggc
acctccaccgatgtcgagatcgagggcaagcccgtccatctctctctccagcccaatcct
tcgcatctggaggcggtgaaccccgtcgtcgccggcaaggtgcgcgcgcggcaggacatg
tcgggcgatgtgaagacgcgctccagcgtcatgggcattctgctgcatggcgatgcggcc
tttgccggccaaggcctggtctatgagaccttggccatgtcccagctcatcggctaccgc
accggggggacgatccatatcgtcaccaacaaccagatcggcttcaccaccgtccccgcc
catgcctattcggggctgtattgcaccgatgtggccaaggccatccaggcgccgatcctg
catgtgaatggcgatgacccggaggcggtggtctggtgcgcgcggctttgcgccgaattc
cgcatgcgtttccaggcggatatcgtgctcgacatcgtctgctatcgccgccacggccat
aatgagagcgacgagcccgccttcacccagcccaccatgtacagccgcatccgccagatg
aagacgacgcgcaccctctacgccgagcgcctggccgccgaaggctcggtcacggccgag
gatgcccaatccatccaggatgagttcaacgcgcggctggaggatgccttccaggccgca
tccagcttcaagcccaacaaggcggattggctggaggggcattggtccggcctcaaggct
gtcggcggcacggaccaggtcgagcagctgcacgacaccgccgtgacgctggacacgctg
cgcgaggtgggcggcgcgctctgccgcgtgccggcggatttcaacgccaattccaagatc
atccggcagctcgaagccaagaagcaggccatcgagaccggcgagggcctggactgggcg
acgggcgaggcgctggccttcgggacgctgctgctggaaggccaccgcgtccgcctctcg
ggcgaggatgtgcagcgtggcaccttcagccaccgccattgcgtcctggtggaccaggtg
gatcagcgcgaatacgcgccgctgaacaatatccgcgaaggccagccgaaattcgaggcc
ttcaactcgctgctgagcgaggcgggcgtgctcggcttcgactacggctattccctggcc
gaccccaagacgctggtgctctgggaagcgcaattcggtgatttcgccaatggcgcgcag
gtcatcattgaccagttcatcgcatcgggcgagaccaagtggctgcgcatgtccggcctt
gtcatgctgttgccgcatgggcatgaaggccaggggccggagcattcctccgcccggccg
gagcgctatctgcaactttgcgccgagcgcaacatgcgcatctgcaacttcactacgccg
gccaattacttccacgcgctgcgccgccagctcaaggcgaattaccgcaagccgctggtg
gtgatgacgccgaaatcgctgctgcgccacaagcttgccatcagcagcctggcggaattc
ggcccgggctcggccttccgctacgtcatccccgagatggacgcgatcgccccggaggaa
aaggtgaagcgcgtcgtgctctgcaccggcaagatctactatgacctctggcaggagcgg
cgggacaagggcatccaggatgtggccctgatccgcgtggagcagctttatcccttcccg
gccaagagcctcgccatggcgctggccccctacaagaatgccgaggtggtctggtgccag
gaggagcccgagaacatgggcgcctggaatttcgtggaccgccgcatcgagaaggttctg
aaggacatcggcggcaaggcgtcccgccccgaattcgtggggcgcgaggccgcggccagc
cccgccaccggcctcgccaaggtgcaccaggcccagcaggaagcgctggtccggcaggcc
ctgggcctctga
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