Shewanella rhizosphaerae: K0I63_12570
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Entry
K0I63_12570 CDS
T09262
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00071
Fatty acid degradation
srhs00280
Valine, leucine and isoleucine degradation
srhs00310
Lysine degradation
srhs00362
Benzoate degradation
srhs00380
Tryptophan metabolism
srhs00410
beta-Alanine metabolism
srhs00640
Propanoate metabolism
srhs00650
Butanoate metabolism
srhs00907
Pinene, camphor and geraniol degradation
srhs00930
Caprolactam degradation
srhs01100
Metabolic pathways
srhs01110
Biosynthesis of secondary metabolites
srhs01120
Microbial metabolism in diverse environments
srhs01200
Carbon metabolism
srhs01212
Fatty acid metabolism
Module
srhs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I63_12570 (fadJ)
00650 Butanoate metabolism
K0I63_12570 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
K0I63_12570 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0I63_12570 (fadJ)
00310 Lysine degradation
K0I63_12570 (fadJ)
00380 Tryptophan metabolism
K0I63_12570 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I63_12570 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0I63_12570 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0I63_12570 (fadJ)
00930 Caprolactam degradation
K0I63_12570 (fadJ)
Enzymes [BR:
srhs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0I63_12570 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0I63_12570 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0I63_12570 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
QYK11610
LinkDB
All DBs
Position
complement(2851111..2853231)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKSFTLNRLDNGIAVLTMDVPGETMNTLRAEFGPEICEMLAEIKADTGIRGVVIISGKK
DSFVAGADISMLDACATAEDARELSKQGHEVFFALESLSIPVVAAINGACLGGGLELALA
CHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKM
GLVDDVVPESILLQTAIEMALAGARPAKKPKLSTVEKLLEGTPVGRNIIFEQALKQVNKK
TQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSSESEALRSIFFATTEMKKES
GAGDVSPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKDISETGLSNALAYAYKLLAK
GVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLDLKHQMVKDVERECGEHT
IFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIATTVAFAR
KQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNGKGFYQYGAKSKKKLVDESV
YGVLGLTPGADSEPRTLAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGG
PFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDRLVEMAESGSKFYE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagttttacattaaatcgtctcgacaacggcatcgccgtgctgaccatggat
gtacctggcgagaccatgaatacccttagagccgagtttggcccggagatctgtgagatg
ttggccgagatcaaggccgatacagggattcgcggtgtggtgatcatctcgggtaagaag
gactccttcgtagcgggcgccgatatctctatgctggatgcctgcgctaccgccgaagat
gccagagagctgtctaagcagggtcacgaggtgttttttgcgctggagtcgctctcgatt
cccgtggtagccgctatcaatggcgcctgtctcggtgggggattagaactggccctggct
tgtcatcagcgtgtctgtaccgacagcaacaagaccatgttggggctgcccgaggtgcaa
ctcggcctgctgccaggtggcggcgggactcagcgtctgccacgtttagtgggtattgcc
aagtcgctggatatgatgctcaccggcaagcagctgcgcgccaagcaggcattgaagatg
gggctggttgacgatgtggtgccggaatcgattctgctgcagacggcgatagagatggca
ctggctggcgcacgtccggcgaagaagccaaagctgtcgacagtagagaagctgcttgag
ggtacgcctgttggtcgtaacatcatcttcgaacaggcgcttaagcaggtcaataagaag
actcagggcaactatcctgcgccagagaagatcattgattgtgtgcgtcagggcgtgacc
aaaggcatagtgaaaggcctcgaggttgaggcgcagcactttggcgatcttgtggtctcc
agtgagtcagaggccctgcgcagcatcttctttgcaaccacagagatgaagaaagagtct
ggtgccggtgatgtatcgccaaaggccgtcaacaaggtgatggtactgggcggtggcctg
atgggtggcggtatcgcctctgtgaccaccaccaaggcgaagatcccggtgcgggtgaaa
gatatcagcgagacaggtttaagcaacgcactggcctatgcctataagttgctggccaaa
ggggtgaaacgtcgtcacatgacgcctgcggtgcgcgataacctgatggcgctgatgacc
accaccaccgaatataaagggatcaaggatgcggacatggtggtggaagccgtgtttgaa
gatctagacctcaagcatcagatggtgaaggatgtcgagcgtgaatgtggcgagcatacg
atttttgcctcgaatacctcatccctgcccatcaagcagatcgccgaggctgccgagcgt
cctgagaatgtgattggcctgcactacttctcgccggttgagaagatgcctctggtcgag
gtgattgcccatgataagacctcaccacagactatcgccactacagttgcctttgcccgc
aagcagggaaagacgcctatcgtggtgaaagatggtgctggtttctatgttaatcgtatt
ctggcgctctacatgaacgaggcagccaatctgctgctggaagggcagagcgtagatcac
ctggataaagcgctggtgaagtttggtttcccggtaggtcctatgacgctgctcgatgag
gtcggcatagatgtgggcgccaagatctcgccgattctggagaaggagttgggtgaacgc
ttcaaggcacccgccgcctttgacaagctcttggccgatgaccgtaagggccgtaagaat
ggtaagggcttctaccaatatggtgctaaatcgaagaagaagttggtggatgagagcgtc
tatggtgtgcttgggttaacacctggcgccgacagcgagccaagaacgctggccgagcga
tgtgtggtgcagatgctcaatgaagcggttcgttgtctggaggaggggattatcgcctcg
ccacgagacggtgatatcggcgcaatatttggcatcggattcccgccattcttgggtggg
cctttccgttacatggactccttgggtgccaagcacttggtcgagaccttgaaacgttat
caagatcaattcggggatcgtttcgcgccatgtgatcgtctagtcgagatggccgaatcg
ggcagcaagttctacgaatag
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