Shewanella rhizosphaerae: K0I63_16880
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Entry
K0I63_16880 CDS
T09262
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00052
Galactose metabolism
srhs00511
Other glycan degradation
srhs00600
Sphingolipid metabolism
srhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
K0I63_16880
09103 Lipid metabolism
00600 Sphingolipid metabolism
K0I63_16880
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
K0I63_16880
Enzymes [BR:
srhs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
K0I63_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
YicC_N
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
QYK12391
LinkDB
All DBs
Position
3905934..3909188
Genome browser
AA seq
1084 aa
AA seq
DB search
MINRFSLLQRLSYALTLSLVFGLVISNPALARDRWQDHTLFEINKLAPHASFFGYESEPL
ALLDEMERSQHYLDLNGRWHFHLAKNPAATPKEFAAPEFDASHWGSIQVPGNFETQGYGH
AIYLDERYPFDTKWPDAPNDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGR
EVGYSQGAKTPAEFDITPYLQVGENLLAMQLIRWSDASYLESQDMLRMTGIEREVYLYAT
PKQRIEDIQVVTHLNQDLTRAKLAIRVNLTSHQSEVRALELEARLLDPQGKQVAKANQRL
SLKGDTKLDFSQTLKHPKLWNAETPNLYRLILTLKTEAGETLQVASQQIGVRKIAIEKGQ
LKVNNKAITIRGVDRHETDPQTGHVVSRETMELDIRLMKQNNINAVRSSHYPNHPYWLSL
ADRYGLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLG
NEAGEGKLFERLYQWIKQRDPSRPVQYEPAGKAPYTDIVAPMYPSIERIREYAERASDRP
LIMIEYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVDQALAFSNDLGQRYWAYGKDY
HPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPIKLRDFKIEGDKAWVNLINGYDFAS
TSGLSLNWTLQRDGKIIANKRQTMPTLSPGEQARVSFKLPSKQILSAPFEYHLLLEVLVD
TPRPLLPSDHRIAFEQFALPRSGAKAAYQVKKNQAKISEDSGSYRLTSGDLSYEFDKRSG
WLTQIYQEGEPQLKGPLMANFWRAPTDNDLGNQMPEWAGAWQDAATELEVTAIDVDPALG
LTISQSHAEMGFSLRTRYSLDNAGRLAIDSQFIPGNKPLADLPRFGFSTRLGFQHRYLSY
FGRGPEETYTDRQSGNPLGWYALPIEQTYHRYPRPQETGQRTQVRYAAVTDQRGQGWLAI
ANLAQRGNKAGELSGDQGSKEADEVATLQTSLWPFAQADIDFRRGDAQDSASGLVAVTRN
HGAEIPLRKFVTWNIDYRQMGVGGDTSWGRPVHAPYRIKAEPIRFGFTLMPVAAKDDIPT
LARQ
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgcttctctcttctacagagactctcgtatgcacttactctctccctagtc
tttgggctagtaatctccaacccggcgctggcaagggatcgctggcaggatcacacccta
tttgagatcaacaagctggcgccccatgccagcttcttcggctatgagtccgagcccttg
gcgctgttagatgagatggaacgcagccagcattatctggatctcaacggccgctggcac
tttcatctggccaagaatcccgccgccacacccaaagagttcgccgctcccgagtttgat
gccagccactggggtagcatacaggtgccgggcaatttcgagacccagggctatggccac
gccatctacctcgacgagcgctatcccttcgacactaaatggcccgatgcaccaaatgat
cacaaccccacaggcctctaccgcaagaccttcaccctgcccgcccattggcaacagaaa
caggtattcatccacataggtgcggcgcgctcggccctcaccctgttcgtcaatggccgt
gaggtcggctacagccagggcgccaagaccccggctgagttcgatatcaccccctacctg
caagtaggcgagaacctgctcgccatgcagctgatccgctggagtgacgccagttaccta
gaaagccaggatatgctgcgcatgacgggcatagagcgcgaggtctacctctatgccacc
cccaagcagcgcatagaagatattcaggttgtcactcatttaaaccaggatctcacccgc
gccaagctcgccatcagggtaaatctcaccagccaccagtcagaggtaagagcccttgaa
ttagaggcgcgcctgttggatccccagggcaagcaggtcgcgaaagctaaccagcgcctg
agcctgaaaggcgataccaagctcgactttagccagaccctaaagcatcccaagctgtgg
aacgccgagaccccaaatctgtaccggctcatcctgaccctcaagacagaggcaggagag
acacttcaggtcgccagtcagcagataggcgtgcgtaagatcgccatcgagaagggtcaa
cttaaggtcaacaacaaggcgatcaccatacgcggcgtggatcgtcacgagacagatccc
caaaccggccatgtggtcagccgtgagaccatggagctggatatccgcctgatgaagcag
aacaacatcaatgcggtacgctccagccactaccccaatcatccctactggctcagcctc
gccgaccgctacggcctgtatgtgatcgatgaggccaacatagagtcccacccgctggcg
atagacgacaagacccagctgggcaacgagatgagctggctgcccgcccatcaggcgcgt
atcgagcgtatggtcgagcgcgacaagaaccacccctcggtgatcatctggtctctgggt
aatgaggccggtgaaggcaagctgttcgagcgcctctaccagtggataaagcagcgggat
cccagccgcccggtgcagtatgaaccggcgggcaaggcgccatacacggatatcgtcgct
cccatgtatccctccatcgagcggatacgcgaatacgccgagcgcgccagcgaccgaccg
ctgatcatgatcgagtacgcccacgccatgggcaactcggtgggcaacctgcaagactac
tgggatgtgatagaggcctatccccaactacagggcggtttcatctgggactgggtggat
caggcgctggccttcagcaacgatttaggtcagaggtactgggcctacggcaaggactat
caccccgatatgcccaccgacggcaacttcctcaacaacggcctggtggatcccgaccgt
aatccccatccccacctgagcgaggtgaagaaggtctatcaacccatcaagttgagagac
tttaagattgagggtgataaggcctgggtgaatctcatcaacggctacgacttcgcctcc
acctcaggcctgagcctgaactggacgctgcagcgagatggcaagatcatcgccaataag
cgccagaccatgccgacactctcccctggcgagcaggcccgggtgagcttcaagctgcct
agcaaacaaatcttaagcgcccccttcgagtatcacctgctactcgaggtgctggtcgat
acgccgaggccgctgctaccgagcgatcaccgtatcgccttcgagcagttcgccttgcct
cgctccggggctaaagccgcttatcaagtaaagaaaaaccaggccaagataagcgaagat
agcggcagctatcgcctcacctcgggtgatctgagttatgagttcgataagcgcagcggc
tggctaacccagatctaccaagagggggagccccaacttaaggggccactgatggccaac
ttctggcgagcacctaccgataacgatctggggaaccagatgcccgagtgggccggggcc
tggcaagacgcggcgactgagctagaagtcacggcgatcgacgtcgaccccgcccttggc
ctgaccatcagccagagccatgccgaaatgggctttagcctgcgcacccgctacagcctg
gataatgcagggcgcctggctatcgacagccaatttatccctgggaataagccgctcgcc
gatctgccccgcttcggcttcagcacccggctaggctttcagcacagatacctgagttac
tttggccgcggcccagaggagacctacaccgatcgccagtcgggcaatcccctgggctgg
tatgccctgccgatagagcaaacctatcacagatatccaagaccccaggagacgggccag
cgcacccaggtgcgctacgccgcggtgacagatcaaaggggtcagggatggctagcgatc
gctaacctggcccaacgcggaaataaggccggagagttgtccggagatcagggcagcaag
gaggcagatgaggtcgccaccctacagaccagcctttggccattcgcccaggcagacata
gattttcgccgcggcgatgcccaggactcggcctcgggactggtggccgtcacccgcaat
catggcgccgagatcccgcttaggaagttcgtcacctggaatatcgattaccgccagatg
ggcgtcggcggtgatacctcctggggccgtcctgtacatgcgccctaccgcatcaaggcc
gagccgatccgcttcggctttaccctgatgccagtggctgcaaaggacgatatccccacc
ctggcaagacaataa
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