Shewanella rhizosphaerae: K0I63_19240
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Entry
K0I63_19240 CDS
T09262
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs03030
DNA replication
srhs03410
Base excision repair
srhs03420
Nucleotide excision repair
srhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I63_19240 (polA)
03410 Base excision repair
K0I63_19240 (polA)
03420 Nucleotide excision repair
K0I63_19240 (polA)
03440 Homologous recombination
K0I63_19240 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhs03032
]
K0I63_19240 (polA)
03400 DNA repair and recombination proteins [BR:
srhs03400
]
K0I63_19240 (polA)
Enzymes [BR:
srhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I63_19240 (polA)
DNA replication proteins [BR:
srhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K0I63_19240 (polA)
DNA repair and recombination proteins [BR:
srhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K0I63_19240 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0I63_19240 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYK12829
LinkDB
All DBs
Position
4422051..4424801
Genome browser
AA seq
916 aa
AA seq
DB search
MPNIAENPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQMAV
VFDAKGKTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVIGT
IARQASQEGRAVLISTGDKDMAQLVDDKITLINTMTNTILGPDEVSEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTALAMLQGVGGVEAILANPEKMPELGFRGAKTMPAKIAEHG
DMLKLSYELATIKCDVELEQDWHQLNIQDADRDELIKCYGEMEFKRWLAEVLDNKSNADS
QEEAEETPAPQAIDTQYDTILTWEALDEWLKTLAAAPLFALDTETTSLNYMEAKLVGLSF
AIEPGKAAYLPLAHDYADAPEQLDSEQVLAKLKPLLEDPSLLKVGQNLKYDMSILANVGI
ALKGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIPLET
AAPYAAEDADITLRLHQHLWPRLQKASELASVFTDIELPLVSILSQIERQGVLIDSMLLG
QQSDELARKIDELEQKAYEIAEEPFNLGSTKQLQALFFEKLGYPVLKKTPKGAPSTAEEV
LVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVDGKTGRVHTSYHQAIAATGRLSSSE
PNLQNIPIRTEEGRRIRHAFVAPEGRKILAADYSQIELRIMAHLSQDKGLLSAFAQGKDI
HRATAAEVFDVDFSEVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQQYIDIYFK
RYPGVLKYMEDTRAAAAEQGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTAA
DIIKKAMINIAQWIETETQGEITMIMQVHDELVFEVDADKADSLKLKVCELMAQAASLDV
ELLAEAGIGDNWEQAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcgctgaaaacccactcattcttgtggatggttcttcctatctttaccgc
gcctactatgcgccgccccacctgaccaactctaagggtgaggccacgggggccgtgtat
ggcgtgatcaacatgctacgcagcctgcttaaccaatataagccaacccagatggcggtg
gtgttcgatgccaagggaaaaaccttccgcaatgagatgtatgccgaatataaggcccac
agaccgcccatgccggacgatctcaggacgcagatcgaaccgctgcatcgcatcattcgc
gccctggggcttcccctggtctgtattcccggcgtcgaggccgatgatgtcataggcacc
atcgccagacaggcgagccaagaaggccgcgccgtgctgatcagcacaggcgataaagat
atggcgcagttggtggatgacaagatcaccctgatcaacactatgaccaataccatccta
ggccccgatgaggtgagcgagaagtttggtgtcggccctgagctgatcatcgacctactg
gcactgcaaggcgataaggcagataacatccccggcctgccaggcgtgggggagaagacg
gcgctggctatgctacaaggcgtcggcggcgtcgaagccatcctagccaacccagagaag
atgccggaactcggctttagaggtgctaagaccatgcccgccaagatcgccgaacatggc
gacatgctcaaactctcctatgagctggcgaccatcaagtgcgacgtcgaactggaacaa
gactggcaccagctcaacattcaagacgcggatcgcgacgagctgatcaaatgctacggc
gagatggaatttaagcgttggctagccgaggtgttagacaacaagtcgaacgccgacagc
caagaagaggcagaagaaacgccggcgcctcaggctatcgatacccagtacgacaccatt
ctgacctgggaagccttagatgagtggctcaagaccctggccgccgcgccgctgtttgcc
ctggataccgaaaccaccagcctcaactacatggaggccaaactggtgggcctctctttc
gccatcgagcctggcaaggccgcttacctgccgctggcacacgattatgccgatgcccct
gagcagctcgacagcgagcaggtactggccaagctcaagccactgctggaagatcctagc
cttctcaaggtcgggcaaaacctcaagtatgacatgagcatactggccaatgtcggcatc
gccctcaagggcgtggccttcgataccatgctcgagtcctatgtgtttaactcggtcgcc
tccaagcacaacatggatgacctggcgctgaaatacctgggtcataagaatatcagcttc
gaagagatcgccggcaagggcgttaagcagctgaccttcaaccagatcccgctggagacg
gcagcaccttacgccgccgaagacgccgatatcacactcaggctgcatcagcatctctgg
ccgagactgcaaaaagccagcgagcttgccagcgtctttaccgacatagaactgcctctg
gtcagcatcttgtctcaaatcgaacgccagggcgtgttgatcgacagcatgttgctgggc
cagcagagcgacgaattggcacgcaagatagatgagctggaacagaaggcctacgagatc
gctgaagagccctttaacctgggctcgaccaaacagctgcaggccctcttcttcgagaag
ctgggttaccctgtattgaagaagacccctaagggcgcaccgtccaccgccgaagaggtg
ctggtcgagctggcactggactatccgctgcccaagatcatcctggagcacaggagctta
tctaagcttaagagcacctacacagacaagttgccgctgatggtcgatggtaagactggc
cgggtacataccagctaccaccaagccatcgccgccacgggtcgcctgtcatccagcgaa
cctaacctgcagaacatccccatccgcaccgaggagggccgccgtattcgtcacgccttc
gtggcgccagagggacgcaagatcctcgctgccgactattcgcagatcgagcttaggatc
atggcccacctctcccaggataagggcctgctgagcgccttcgcccagggtaaggatatt
cacagagctaccgccgccgaggtgttcgacgtcgacttcagcgaagtcaccagcgaacaa
cgtcgccgcgccaaggcggtgaacttcggtctcatctatggcatgtcggccttcggtctg
gcccgccagctggatattccgcgtcacgaggcccagcaatatatcgacatctacttcaag
cgctatcctggcgtgctcaagtatatggaagatacccgcgctgccgccgccgagcaggga
tacgtatcgaccctctatggtcgcaggctctatctaccagccatcaaggatagaaacgcc
atgcgccgtcaggcagcggagcgcgccgcgatcaacgcgccgatgcagggcacggctgct
gacattatcaagaaggccatgatcaatatcgctcagtggatcgagacagagacacaggga
gagatcaccatgatcatgcaggttcacgatgaactggtgtttgaggtcgacgccgacaag
gccgattcgctcaaactcaaggtgtgtgaactgatggcgcaggccgcctcgttagatgtc
gagctactggccgaggctggtatcggcgataactgggaacaggcgcactag
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