Serratia rhizosphaerae: FO014_02405
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Entry
FO014_02405 CDS
T07504
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhz03009
]
FO014_02405 (rimO)
Enzymes [BR:
srhz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FO014_02405 (rimO)
Ribosome biogenesis [BR:
srhz03009
]
Prokaryotic type
ribosomal protein modification factors
FO014_02405 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QHA85920
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Position
509042..510370
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AA seq
442 aa
AA seq
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MSNVASKPPKVGFLSLGCPKNLVDSERILTELRNEGYQVVPRYDDAELVIVNTCGFIDSA
VQESLEAIGEALHENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLSHVHHYVPK
PAHNPFISLIPAQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVESGVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLAGLGVWVRLHYVY
PYPHVDEVIPLMAAGKILPYLDIPLQHASPKILRLMKRPGAVERTLERIKRWREICPELT
LRSTFIVGFPGESEEDFQLLLDFLQQARLDRVGCFKYSPVEGAAANELADPVPEEVKEAR
YHRFMRLQQQISAQRLQEKVGRELLVLIDKIDAEGAIGRSMADAPEIDGVVYLNGETDVN
VGDIVKVKIDHADEYDLWGNRV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtagcaagcaagccgcctaaagttggatttctttcgttaggttgcccaaaa
aacctggtggattcggaacggatcctcactgaactgcgtaacgaaggctatcaggtggtg
ccgcgttacgatgacgccgaactggtgatcgtcaatacctgcggttttatcgacagcgcg
gtgcaagaatcgctggaagccatcggcgaagcactgcatgagaacggcaaggtgatcgtc
accggctgcctcggcgccaaagaagaccaaatccgcgaagtgcatcccaaagtgctggaa
attaccgggccgcacagctacgaacaggttttgtcgcacgttcatcactatgtgccgaag
ccggcgcataacccgttcatcagcctgatcccggcgcagggcgtcaagctgacgccgaag
cactacgcctacctgaaaatctccgaaggctgcaaccaccgctgcaccttctgcattatt
ccgtcgatgcgcggcgatctcgacagtcgtcctatcggctcggtgctggatgaagctaaa
cgcctggtggagtccggcgtcaaagagctgctggtgatctcccaggacacctcggcctac
ggcgcggacgtcaaacagcgcaccggcttctggaacggccagccggtcaaaaccagcatg
gtcagcctgtgcgaacagctggccggcctcggcgtctgggtgcgtctgcactatgtctac
ccgtacccgcacgtggacgaggtgatcccgctgatggctgccggcaagatcctgccgtat
ctggatattcccctgcagcacgccagcccgaaaatcctcaggctgatgaagcggccgggc
gcggtcgaacgcacgctggagcgcatcaaacgctggcgtgagatctgcccggaactgacg
ctgcgctccacctttatcgtcggctttccgggggaaagcgaagaggacttccagctgctg
ctcgacttcctgcagcaggccaggctggaccgcgtcggctgcttcaagtacagcccagtg
gaaggcgccgcggccaatgaactggcggacccggtgccggaagaggtcaaagaggcgcgc
taccaccgctttatgcggctgcagcagcagatatcggcgcagcgcctgcaggaaaaagtg
ggccgcgaactgctggtgctgatcgataagatcgacgcggaaggtgcgattggccgcagt
atggccgatgcgccggagatcgacggcgtggtgtacctgaacggcgaaaccgacgtgaat
gtgggcgatatcgtcaaggtgaaaatcgaccacgccgacgaatatgatctgtggggcaac
cgcgtctga
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