Serratia rhizosphaerae: FO014_10580
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Entry
FO014_10580 CDS
T07504
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz00540
Lipopolysaccharide biosynthesis
srhz01100
Metabolic pathways
srhz01250
Biosynthesis of nucleotide sugars
Module
srhz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FO014_10580 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srhz01005
]
FO014_10580 (rfaD)
Enzymes [BR:
srhz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FO014_10580 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
srhz01005
]
Core region
FO014_10580 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QHA87356
UniProt:
A0A857EFA9
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All DBs
Position
complement(2251806..2252738)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNDKGYRDILVIDNLKDGTKFINLVDLDIADYMDKEDFIASI
VAGDDFGDVEAVFHEGACSATTEWDGKYMMDNNYQYSKDLLHYCLDRQIPFLYASSAATY
GGRSENFIEERQYEQPLNVYGYSKFLFDQYVREILPEADSQICGFRYFNVYGPREGHKGS
MASVAFHLNGQIGRGENPKLFAGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ETFQAVADAVVDFHQKGAVEYIEFPEKLKGRYQAYTQADLTNLRAAGYNAPFKTVAEGVK
EYMAWLNRTA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggcatgatcggcagcaacatcgttaaggcactgaat
gacaaagggtatcgtgacattctggttatcgataacctgaaagacggcaccaaattcatc
aatctggtcgatcttgatattgccgactatatggataaagaagattttatcgccagcatc
gtcgccggcgacgacttcggcgatgttgaggcggtgttccatgaaggcgcctgctccgcc
accaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagatctg
ctgcactactgcctggatcgccagattcctttcctgtacgcctcttccgccgccacctac
ggcggccgcagtgaaaactttatcgaagagcgtcagtacgagcagccgctgaacgtttac
ggctactccaaattcctgttcgaccagtacgtgcgtgaaatcctgccggaagccgactcc
caaatctgcggcttccgctatttcaacgtctacggcccgcgtgaaggccacaaaggcagc
atggcgagcgtggccttccacctcaacggccagatcggccgcggcgagaacccgaaactg
ttcgccggcagtgaaaacttcaagcgcgacttcatctacgtcggcgacgtggcggcggtc
aacctgtggttctggcagaacggcgtctccggcatcttcaactgcggcaccggccgggcg
gaaaccttccaggcggtggctgacgcggtggtggacttccaccagaaaggcgcggtggaa
tacattgagttcccggaaaagttgaaaggccgctatcaggcttatacccaggccgatctg
accaatctgcgcgcggcgggctacaacgcaccgtttaaaaccgtggccgaaggcgtcaaa
gagtacatggcctggctcaaccgcaccgcttaa
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