Streptomyces rimosus: CP984_10365
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Entry
CP984_10365 CDS
T07052
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
srim
Streptomyces rimosus
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srim03009
]
CP984_10365 (rimO)
Enzymes [BR:
srim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP984_10365 (rimO)
Ribosome biogenesis [BR:
srim03009
]
Prokaryotic type
ribosomal protein modification factors
CP984_10365 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEV75373
LinkDB
All DBs
Position
complement(2564228..2565721)
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLRTIL
SGGSVEAHAPRDRRKLLPISPAERQDAAGVALPGHGDTAPAPAPADLPEGVAPASGPRAP
LRRRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIML
VSENNTSYGKDLGDIRLLETLLPELAAVDGLERIRVSYLQPAEMRPGLIDVLTQTEKVAP
YFDLSFQHSAPDVLRAMRRFGDTDRFLGLLEQIRAKAPQAGARSNFIVGFPGETEEDVAE
LERFLTGARLDAIGVFGYSDEDGTEAATYDGKVDPDEVAERLAHISRLAEELTAQRAEER
LGETLTVLVDSVDEEDGIVGRAAHQAPETDGVTLLRTSLDLAPGRMVEAKAVASEGVDLV
AEVLSVDGVPCTEEAGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggagctcgtcgaggaagccgcc
gatgccgatgtcgccgtcgtcaacacctgcggattcgtcgaggccgccaagaaggactcc
gtcgatgccctgctggaggccaacgatctgaaggaccacggccgcacccaggccgtggtg
gccgtcggctgcatggccgagcggtacggcaaggagctggccgaggccctgccggaggcc
gacggcgtgctcggcttcgacgattacaccgacatctccgaccggctgcgaacgatcctg
agcggcggcagcgtcgaggcccacgccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcggcaggacgccgccggtgtggcgctgcccggccacggcgacaccgcgccg
gccccggcccccgctgacctgcccgagggcgtggcgcccgcctccggcccccgtgcgccg
ctccggcgccgcctgggcaccagccccgtggcctccgtgaagctggcctccggctgcgac
cgccgctgctccttctgcgccatcccgtccttccgcggctccttcatctcgcgccgcccc
tccgacgtgctcggcgagacgcgctggctggcggagcagggtgtgaaggagatcatgctg
gtctccgagaacaacacctcctacggcaaggacctgggcgacatccgcctgctggagacg
ctgctgccggagctggcggccgtcgacggcctggagcggatccgggtcagctacctccag
cccgccgagatgcggccgggcctgatcgacgtgctgacgcagaccgagaaggtcgccccg
tacttcgatctgtccttccagcactcggccccggacgtgctgcgcgccatgcggcgcttc
ggcgacaccgaccgattcctcggcctgctggagcagatccgtgcgaaggccccgcaggcc
ggcgcccgctcgaacttcatcgtcggcttccccggcgagaccgaggaggacgtggccgag
ctggagcgcttcctgaccggggcgcgactggacgcgatcggtgtgttcggttactcggac
gaggacggcaccgaggcggccacgtacgacggcaaggtggacccggacgaggtcgccgag
cgcctcgcgcacatctcgcggctggccgaggagctgaccgcgcagcgcgccgaggagcgg
ctcggggagaccctgaccgtcctggtggacagcgtcgacgaggaggacggcatcgtgggg
cgggccgcgcaccaggcgcccgagaccgacggtgtgaccctgctgcggacctcactcgac
cttgcgccgggtcgtatggtcgaagcaaaggccgtggcgagtgaaggcgtcgacctggtg
gccgaggtgctgtcggtggacggcgtgccgtgtactgaggaggcgggcagatga
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