Serratia plymuthica 4Rx13: SOD_c16080
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Entry
SOD_c16080 CDS
T02710
Symbol
rlmL
Name
(GenBank) ribosomal RNA large subunit methyltransferase K/L
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c16080 (rlmL)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
SOD_c16080 (rlmL)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
SOD_c16080 (rlmL)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOD_c16080 (rlmL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
THUMP
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_15
N6_Mtase
Methyltransf_24
SAM_MT
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
AGO54593
LinkDB
All DBs
Position
1771723..1773843
Genome browser
AA seq
706 aa
AA seq
DB search
MNSLFASTARGLEELLKSELEALGAHACKVVQGGVHFQGDDRLLYQSLLWSRLASRILLP
LNEFRVHSDLDLYLGVQAIDWTNIFGVDKTFAVHFSGVNEEIRNSQYGALKVKDAIVDSF
TRKIDQRPTVAKQQPDIRVNVFLQRDMASVALDLSGEGLHQRGYRDLTGQAPLKESLAAA
IVQRSGWQPGTPMLDPMCGSGTLLIEAAMIASDRAPGLHRQHWGFTAWNGHNVDLWREVI
TEAQVRARRGLQETTSRFFGSDIDRRVIEMARGNARRAGVAELITFNVSDVSKLTNPLPE
GPTGTVVSNPPYGERLESEPALIALHNMLGRIMKSAFGGWQLSLFSASPELLSCLQLRAE
RQFKAKNGPLDCVQKNYQLAENPQGAGGVLAAEDFANRLRKNLKKLDKWAKQQGIECYRL
YDADLPEYNVAVDRYGSKVVVQEYAPPKTVDAQKARQRLFDVINATLSVLDLPSNQLILK
TRERQKGKNQYEKLAQKGEFLLVEEFNAKLWVNLTDYLDTGLFLDHRIARRMLGEMSKGK
DFLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAEKNLRVNGLTGKQHRLIHADCLS
WLHNADEQFDVIFIDPPTFSNSKRMENTFDVQRDHLVLMQDLKRLLRRNGTIMFSNNKRG
FQMDMAGLSELGLEAKEITAQTQSQDFARNRQIHNCWLLTHAGEGK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctgtttgccagcacggcgcgtggactggaagaactgttaaaaagcgaactg
gaagcgctgggcgctcacgcctgcaaagtggtgcagggtggggtacattttcagggtgac
gatcgtcttctgtaccaaagcctgctgtggagccgcctggcctcacgtattttgctgccg
cttaatgaattccgcgtacacagcgatctggacctgtatcttggcgtgcaggcgatcgac
tggacaaacatttttggcgtggataaaaccttcgccgtgcacttcagcggcgttaacgaa
gagatccgtaacagccaatatggcgcgctgaaggtcaaggacgccattgtcgacagtttc
acccgtaagatcgaccaacgcccgacggtggcaaagcaacagccggacattcgcgttaat
gtgttcctgcagcgcgatatggccagcgtagcgctcgatctgagcggcgaaggtctgcat
cagcgcggctaccgtgatctgaccggccaggcgccgctgaaggaaagcctggcggccgcg
attgtgcagcgttcaggctggcaaccgggcacgccgatgcttgacccgatgtgcggttca
ggtaccctgctgattgaagcggcgatgatagcctccgatcgcgcaccgggtttgcaccgt
cagcactggggctttaccgcctggaacggccacaatgtcgatttgtggcgtgaagtgatc
accgaagcgcaggtgcgcgcgcgccgtggtctgcaggaaaccacctcgcgtttcttcggc
tcggatatcgatcgccgggtgattgagatggcacgcggcaatgcccgccgcgccggcgtt
gctgaactgattacttttaacgtcagcgacgtcagcaaactgaccaacccgctgccggaa
ggcccaacgggtaccgtagtcagcaacccgccttacggtgagcgtctggaaagcgaaccg
gcgctgatcgcgttgcataatatgctgggccgcattatgaagagcgccttcggcggctgg
caactgtcgctgttcagcgcgtcgccggagctgctgagctgcctgcaactgcgcgccgaa
cgccaattcaaggctaaaaacggtcctctggattgcgtacagaaaaactaccaattggcg
gagaacccgcagggcgccggcggcgtgctggcggcggaagacttcgccaaccgcctgcgc
aagaacctgaaaaaactcgataagtgggccaagcagcagggcatcgaatgttatcgcctg
tacgacgccgatctgccggaatacaacgttgcggttgaccgctacggcagcaaagtcgtg
gtgcaggagtatgcgccgccgaaaaccgtcgatgcgcagaaggcgcgtcagcgtctgttc
gacgtgatcaatgccacgctgtcggtgctggacctgccgtcaaaccaattgatcctgaaa
acccgcgagcgtcagaagggcaaaaaccagtacgaaaagctggctcagaaaggtgagttc
ttgctggtggaagagttcaatgccaagctgtgggttaacctgactgactatctcgatacc
ggtttgttcctcgatcaccgcatcgcgcgccgcatgttgggcgagatgagcaaaggcaaa
gacttcctcaacctgttcgcttataccggcacagccagcgttcacgccggattgggcggc
gcgcgcagcaccactaccgtggatatgtcgcgtacctacctggaatgggcggagaagaac
ctgcgcgtcaatggcctgaccggtaaacagcatcgattgatccatgcggactgcctgtca
tggctgcataatgccgacgaacagttcgacgtgatctttatcgatccgccgacgttctcc
aactccaagcgaatggagaacacctttgacgtccagcgcgatcacctggtgttgatgcaa
gatttaaaacggttgctgcgtcgtaacgggaccatcatgttctcgaacaacaagcgcggt
ttccagatggatatggccggcctgagcgaactgggtctggaggcgaaagagatcaccgcc
cagacgcagtcgcaggactttgcccgtaaccgtcaaattcataactgctggctgctcacc
catgccggcgaaggaaaataa
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