Serratia plymuthica 4Rx13: SOD_c37380
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Entry
SOD_c37380 CDS
T02710
Symbol
ldcC
Name
(GenBank) lysine decarboxylase, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00310
Lysine degradation
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SOD_c37380 (ldcC)
Enzymes [BR:
srl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SOD_c37380 (ldcC)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AGO56691
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Position
complement(4205304..4207460)
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AA seq
718 aa
AA seq
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MNIIAIMSPTGVYYKDEPIRELHTALATMGFQLVYPKNGGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINQYSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQHEFTHESIAGRVAATANASWPVH
AVITNSTYDGLLYNTDYIKQTLDVPSIHFDSAWVPYTNFHPIYEGKSGMSGERTPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPNYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD
SDHMYLDPIKVTILTPGMNELGTLEESGIPAALVAKYLDECGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLFAEDPDFYRNMRIQDLAAGIHRLICRH
DLPRLMLRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPPADINV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgcaatcatgagcccaacgggcgtctattacaaagatgagcctattcgt
gagctgcacaccgcattggctacgatgggtttccagttggtttacccgaaaaatggcggt
gatctgctgaagctgatcgaggccaatgcgcgtatttgcggagtgattttcgattgggac
gactacagcctggagctgtgcagcgaaattaacgagctgaatgaatatctgccgctatat
gcgtttatcaaccagtattccaccttcgacgtcagtctgcatgaaatgcgcatggtgctg
tatttctttgagtatggcttgaatgcggcagatgatattgcgcagcgtatccagcaatac
accgcagaatatatcgacaccattacgccgcccttaaccaaggcactattcaactatgtg
cgcgagggcaaatacactttttgcaccccagggcatatggccggcactgccttccagaaa
agcccggttggctgcctgttttacgattttttcggtgccaacaccttaaaagccgacgtc
tccatatcggtgaccgagctgggttcgctgctggaccataccggcccgcatctggaggct
gaagagtatattgcgcgtacctttaacgccgagcagagctatctggtgaccaatggcacc
tccaccgccaacaagattgtcggcatgtattcggccccggcaggcagcacggtgttgatt
gaccgcaactgccataaatcgctgtgccatctgctgatgatgagcgatatcgtcccgatc
tacctgcgcccgctgcgtaatgcctacggcattcttggcggtattccgcagcatgagttt
acccatgagagcattgccggccgggtcgccgccactgcgaatgccagttggccggtacat
gcggtgatcaccaactcgacttatgacggcctgctgtataacaccgattacatcaagcag
acgctggatgtgccatcaatccattttgactccgcctgggtaccctataccaacttccat
ccaatctacgaaggcaagagtggtatgagcggtgaacggacgcccggcaaggtgatctac
gaaacgcagtccacgcacaagctgctagcggcattctcgcaggcctcaatgattcacatt
aaaggcgattacgacgaaagcacctttaacgaagcttatatgatgcataccaccacttcg
ccgaactacggcattgtggcgtcgatggagactgccgccgcaatgctgcgcggcaaccct
gggcgacggttgattaaccgctcggtagagcgcgcgctgcatttccgtcgtgaggtgcag
cggttgcgggaggagagcgatagctggttcttcgatatctggcagcctgaagagatcgac
gaggcgcaatgctggccgttgaacccggacgataattggcatgggtttggcaataccgac
agcgatcatatgtatctcgatccgatcaaggtgacgatcctgacgccgggaatgaacgag
ctgggtacgctggaggagagcgggatcccggcggcgctggtggcgaaatacctggacgag
tgcggcatcgtggtggaaaaaaccgggccttataatctgctgttcctgttcagcatcggc
attgataaaaccaaggcgatgagcttactgcgtggcctgaccgattttaaacgtgcttac
gatcttaatctgcgggtgaagaacatgctgccggatctgttcgcggaggatcctgatttc
tatcgcaatatgcgcattcaagatctggcggccgggatccaccggttgatctgccggcac
gatctgccgcggctgatgctgcgggcattcgatgtgctgccggaaatgaagctgacgccg
caccaaatgttccagcagcaggtacgtggcaatgtggaaacctgcgaactggatcaactg
gtgggtaaggtggcggccaatatgatcctgccttatccaccaggcgtgccgttagtgatg
ccgggtgagatgatcactgaagagagccgtgcggtgctcgatttcttgctgatgctgtgc
tccatcggcgagcgttatcccggctttgaaaccgatatccacggtgcgaaattgaccgag
gacgggcgttatctggtgaaggtactgaaaacgccgccggccgatatcaacgtttga
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