Skermanella rosea: JL101_007545
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Entry
JL101_007545 CDS
T07666
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sroe
Skermanella rosea
Pathway
sroe00190
Oxidative phosphorylation
sroe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JL101_007545
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL101_007545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sroe03019
]
JL101_007545
Enzymes [BR:
sroe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JL101_007545
Messenger RNA biogenesis [BR:
sroe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JL101_007545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UEM05281
LinkDB
All DBs
Position
1621904..1624051
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AA seq
715 aa
AA seq
DB search
MTSAQEIETPDIDPTSPDRFINRELSWLAFNQRVLEESLNVNHPLLERLRFLSISASNLD
EFYMVRVAGLKAQVRAGITTLSDDNLSPAQQLAAVNQRVIELMRDQQNGWRTLRKELREA
GITVVDPSELTDSEMDWLEARFLDDIFPLLTPIAVDPAHPFPFIPNLGFSLALQLYDPDR
SQNLDALLPMPSQLDRFVRLPGSDVRFVLLEQLVLLFLDRIFPAPFKLTGHGVFRILRDS
EMEIDEEAEDLVRTFESALKRRRRGSVIRLAVNIGMAPDLREFLRNQLSVSNDDVFVLEG
LIGLADTKQLIIEERPDLVFPPYNARFPERIRDFGGDCFAAIRHKDIVVHHPYESFDVVV
QFLRQAARDPAVVAIKQTLYRTSKNSPIVAALIEAAEAGKTVTAMVELKARFDEEANIQW
ARDLERAGAQVVYGFVDLKTHAKVSLVVRREAKGLRSYVHFGTGNYHPITAKVYTDLSFF
TCDPALCHDAAFMFNYMTGYATPKSLEKVSIAPLALREKLVELIDREIAFARAGKPARIW
VKLNSLVDSRLIDKLYEASQAGVVIDMIMRGICCLRPGVPGLSDNIRVKSIVGRFLEHGR
IICFGNGHSLPSPEAKVYISSADWMPRNLDRRIETLVPIENPTVHQQILDQIMVANLKDE
AQSWFLVSDGSYRRAKVDKEAFSAHTYFMTNPSLSGRGSAISGARIPPRLVLQSK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcgcgcaggaaatcgagacacccgacatcgatccgacctctccggaccggttc
atcaatcgtgaactgtcctggctggcgttcaaccagagggttctcgaggaatcgctgaac
gtcaaccatcccctgctggagcggctgcggttcctgtcgatttccgcgagcaacctcgac
gaattctacatggtccgcgtcgcgggactgaaggcacaggtccgcgccgggatcacgacg
ctgtcagacgacaatctcagcccggcccagcaactggccgccgtcaaccagcgcgtgatc
gagctgatgcgcgaccagcagaacggctggcggacgctccggaaggaactgcgcgaggcc
gggatcaccgtggtggatcccagcgagcttaccgacagcgagatggattggctggaggcc
cgtttcctcgacgacatcttcccgctcctgacgcccatcgcggtcgatccggcccatccg
ttcccgttcatccccaacctcggattcagcctggcgctccaactctacgacccggaccgc
agccagaacctggacgccctgctgccgatgccgtcccagctggaccgcttcgtccggctg
cccggatcggacgtgcggttcgtcctgctggaacagctcgtccttctgttcctcgaccgg
atcttcccggcgccgttcaagctgaccgggcacggcgtgttccggatcctgcgcgacagc
gagatggagatcgacgaggaggcggaggacctggtccgcaccttcgaaagcgcgctgaag
cgtcgccggcgcggcagcgtcatccggctggcggtcaatatcgggatggcgccggacctg
cgggagttcctgcgcaaccagctctccgtctccaacgacgacgtgttcgtgctggaaggg
ctgatcggcctggccgataccaagcagctgatcatcgaggagcgcccggacctcgtcttc
ccgccctacaatgcccgcttcccggagcggatccgcgacttcggcggcgactgcttcgcg
gcgatccggcacaaggacatcgtcgtccaccatccgtacgagagcttcgacgtggtggtc
cagttcctgcggcaggcggcccgcgacccggctgtggtggcgatcaagcagacgctgtac
cggaccagcaagaactcgcccatcgtggcggccctgatcgaggcggcggaggccggcaag
acggtcaccgccatggtggagctgaaggcccgcttcgacgaggaggccaacatccagtgg
gcccgcgacctggagcgcgccggagcccaggtggtctacggcttcgtcgacctgaagacc
cacgccaaggtgtcgctggtggtccggcgcgaggccaagggcttgcgcagctacgtccat
ttcggcaccggcaactaccacccgatcaccgccaaggtctacaccgacctgtccttcttc
acctgcgacccggcgctctgccacgacgccgccttcatgttcaactacatgaccggctac
gcgacgccgaagtcgctggagaaggtctccatagcgcccctggcgctgcgggagaagctg
gtcgaactgatcgaccgggagatcgccttcgcccgcgccggcaagccggcccggatctgg
gtcaagctgaactcgctggtcgattcgcgcctgatcgacaagctgtacgaggcgtcccag
gcgggcgtggtgatcgacatgatcatgcgcggtatctgctgcctgcgccccggcgttccg
ggcctgtccgacaacattagggtcaagagcatcgtcggccgcttcctggagcatggccgg
atcatctgcttcggcaacggccacagcctgccgtctcccgaggccaaggtctacatttcc
tcggcggactggatgccgcgcaacctggaccgccggatcgagaccctggtcccgatcgag
aacccgaccgtccaccagcagatcctggaccagatcatggtcgccaacctgaaggacgag
gcccagagctggttcctggtctccgacggctcctaccggcgggcgaaggtcgacaaggag
gcgttcagcgcccatacctatttcatgaccaatcccagcctgtccggccgcggcagcgcg
atctccggggcgcggatccctccgcgcctggtcctccaatccaagtag
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