Skermanella rosea: JL101_018865
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Entry
JL101_018865 CDS
T07666
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
sroe
Skermanella rosea
Pathway
sroe00633
Nitrotoluene degradation
sroe01120
Microbial metabolism in diverse environments
sroe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
JL101_018865
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL101_018865
Enzymes [BR:
sroe01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
JL101_018865
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
UEM02052
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Position
4041986..4043779
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AA seq
597 aa
AA seq
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MATVSTPNGFSLDNAGRRVVVDPVTRIEGHMRVEVNLDGDNVIRNAVSTGTMWRGLEVIL
KGRDPRDAWAFTERICGVCTGTHALTSVRAVEDALDIKIPENANTIRNIMQLTLQVHDHL
VHFYHLHALDWVDIVSGLKADPKATSDLAQSISSWGKSSPGYFRDIQARLRKFVESGQLG
PFKNAYWGHAAYKLPPEANLMATAHYLEALDFQKEIVKIHTVYGGKNPHPNWLVGGVPCP
INIDGTGGVGAINMERLNLVSSIIDQSIEFVNQVYIPDLIAIAGFYKDWLYGGGLASTSL
MSYGDIPERANDYSDKSLMLPRGVILNGKLDEIHEIDLRAPDQVQEFVSHSWYKYADESK
GLHPWDGVTEPNYVLGPNAKGTKTRIEAVDEGAKYSWIKSPRWKGHAVEVGPLARYVIGY
AQNKPEFKEPVDQLLKALDVPVTALFSTLGRTAARGLECAWAAEKLRYFQDKLVRTIKAG
DETTANTAKWDPSSWPKSAKGVGFTEAPRGALGHWIRIENTKIANYQAVVPTTWNGSPRD
TKGNIGAFEASLLDTPMADPEQPLEILRTLHSFDPCLACSTHVIAPDGRELTEVTVR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgtttcgacgccgaacggattctccctggacaatgcgggccgccgggtggtg
gtcgatcccgtgacccggatcgaggggcacatgcgcgtcgaggtcaacctcgacggcgac
aacgtgatccgcaacgcggtttccaccggcaccatgtggcgcgggcttgaggtcatcctg
aagggccgcgatccacgcgacgcctgggccttcaccgaacggatctgcggcgtctgcacc
ggcacccacgctctgacctcggtccgcgcggtggaggacgcgctggacatcaagatcccc
gagaacgcgaacacgatccgcaacatcatgcagctgacgctgcaggtgcatgaccatctg
gtccatttttaccacctgcacgcgctggactgggtcgacatcgtctccggcctcaaggca
gacccgaaggccacgtcggatctggcccagagcatcagctcgtggggcaagtcctcgccg
ggatatttccgcgacatccaggcccggctgcgcaagttcgtggagagcggccagctcggc
ccgttcaagaacgcctactgggggcacgccgcctacaagctgccgcccgaagccaacctg
atggcgaccgcccactacctggaagcgctcgacttccagaaggagatcgtgaagatccac
acggtctatggcggcaagaacccgcatcccaactggctggtcggcggcgtgccctgcccg
atcaacatcgacgggaccggcggcgtcggcgccatcaacatggaacggctcaacctggtg
tcgtcgatcatcgaccagtcgatcgagttcgtgaaccaggtctatatccccgacctgatc
gccatcgccggcttctacaaggactggctgtacggcggcgggctggccagcacgtcgctg
atgtcctacggcgacatcccggagcgggcgaacgactattccgacaagagcctgatgctg
ccgcgcggcgtcatcctcaacggcaagctggacgagatccacgagatcgacctgagggcg
cccgaccaggtgcaggagttcgtcagccactcctggtacaagtacgccgacgagtccaag
ggcctgcacccctgggacggggtgaccgagcccaactacgtgctcggccccaacgccaag
ggcaccaagacccggatcgaggcggtggacgagggggcgaagtactcctggatcaagtcg
ccgcgctggaagggccacgcggtcgaggtcgggccgctggcccgctacgtcatcggctat
gcccagaacaagccggagttcaaggagccggtcgaccagctcctgaaggcgctggacgtg
ccggtcaccgccctgttctccaccctgggccgcaccgcggcgcgcgggctggaatgcgcc
tgggcggcggagaagctgcgctacttccaggacaagctggtccgcaccatcaaggccggc
gacgagaccacggccaacaccgccaagtgggacccgtcgagctggcccaagtcggccaag
ggcgtcggcttcaccgaggcgccgcgcggcgcgctcggccactggatccggatcgagaac
accaagatcgccaactaccaggcggtcgtcccgaccacctggaacggcagcccgcgcgac
accaagggcaatatcggcgcgttcgaggcctcgctgctcgacacccccatggcggatccg
gagcagccgctggagatcctgcgcaccctgcacagcttcgacccctgcctcgcctgctcg
acccacgtgatcgcgccggacggcagggaactcaccgaagtcaccgtgcgctga
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