Skermanella rosea: JL101_034905
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Entry
JL101_034905 CDS
T07666
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
sroe
Skermanella rosea
Pathway
sroe00362
Benzoate degradation
sroe01100
Metabolic pathways
sroe01120
Microbial metabolism in diverse environments
sroe01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JL101_034905 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
JL101_034905 (pcaH)
Enzymes [BR:
sroe01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
JL101_034905 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
UEM07764
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Position
pSR-3:246672..247382
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AA seq
236 aa
AA seq
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MKPNTEYTRRDWSSHPPYIVPDYKSTLLRGPTKPLVPLPHGLSELTGPVFGHDSVGPLDH
DLTRNGVRNGEPLGERIIVTGRVMDEAGRPVPHSLIEVWQANAAGRYIHRWDQHDAPLDP
NFFGGGRTVTDAEGRYRFVTIKPGAYPWGNHHNAWRPNHIHFSLFGPSFVTRLVTQMYFP
GDPLLAFDPIYQGIPEKSRERLVSRFSLDVTEPMQALGYEFDIVLRGPRATPTHED
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaatacggaatatacccggcgggactggagcagccacccgccctacatcgtt
ccggactacaagtcgacgctgctgcgcggtccgaccaaaccgctggttccgctgccgcac
ggcctgtcggagctgaccggcccggtgttcggccacgacagcgtcggcccgctcgaccac
gacctgacgcggaacggcgtccggaacggcgagccgctgggcgagcgcatcatcgtcacc
ggccgggtgatggacgaggccggccgcccagtgccgcacagcctgatcgaggtctggcag
gccaacgccgccggccgctacatccaccgctgggaccagcacgacgccccgctcgacccc
aacttcttcggcggcggccgcaccgtcaccgacgccgagggccgctaccgcttcgtcacg
atcaagcccggagcctatccctggggcaaccaccacaatgcctggcggcccaaccacatc
catttctcgctgttcggccccagcttcgtcacccgcctggtcacgcagatgtactttccc
ggcgacccgctgctggcgttcgacccgatctaccagggcatcccggagaagtcgcgcgag
cggctggtgtcgcgcttctcgctcgacgtgaccgagccgatgcaggccctgggctacgag
ttcgacatcgtgctgcgcggcccgcgcgccaccccgacccacgaggactga
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