Spiribacter roseus: BBH56_01110
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Entry
BBH56_01110 CDS
T06143
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sros
Spiribacter roseus
Pathway
sros00020
Citrate cycle (TCA cycle)
sros00640
Propanoate metabolism
sros00660
C5-Branched dibasic acid metabolism
sros01100
Metabolic pathways
sros01110
Biosynthesis of secondary metabolites
sros01120
Microbial metabolism in diverse environments
sros01200
Carbon metabolism
Module
sros_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sros_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BBH56_01110
00640 Propanoate metabolism
BBH56_01110
00660 C5-Branched dibasic acid metabolism
BBH56_01110
Enzymes [BR:
sros01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
BBH56_01110
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AUB77849
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Position
218027..219196
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AA seq
389 aa
AA seq
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MNLHEFQAKHIFSQFGIPIPRGFVARSAAEARSAAQELGGSVQVVKAQVHAGGRGKAGGV
KLAKSIDEVGEYTEAMLGTRLVTHQTDEQGMPINAVMVEEGLDIAREIYLGALVDRASKR
VVFMGSAAGGMDIEEVAATEPEKIVTVRVNPVAGLQPYQCRQMGFALGLTPAQIKQLTQI
MKGLYRCFEDRDLSLIEINPLIVTADDSLLALDAKINVDDNAIEVNRQPEIADMRDLSQE
DETEVQAAEHGLNYITLDGNIGCMVNGAGLAMATMDVIKLHGGEPANFLDVGGGTNKERV
TEAFKIISASPDVQGILVNIFGGIVRCDMIAEGVIAAVKEVGVNVPVVVRLEGTNVEQGK
QLLAESGLDIIPADDLTDGADKVVGAVSA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcacgaatttcaggcgaagcacatcttcagccagttcggtattcccatcccc
cggggcttcgtggcccgctccgcggccgaggcccgctccgctgcgcaggagctgggcggt
tcggtgcaggtggtcaaggcgcaggtccacgccggcggccgcggcaaggccggtggcgtc
aagctggccaagagcattgacgaggtgggcgagtacaccgaggccatgctcggcacccgg
ctggtcacccatcagaccgatgagcagggcatgccgatcaacgcggtgatggtcgaagaa
ggcctggacatcgcccgcgagatttatctcggcgccctggtcgaccgggccagcaagcga
gtcgtgttcatgggctccgccgccggcggcatggacatcgaggaggtggccgccaccgag
ccggagaagatcgtgaccgttcgggtcaatcccgtcgccggtctgcagccctatcagtgc
cgccagatgggctttgcgctgggcctgacgcccgcccagatcaagcagctgacgcagatc
atgaagggcctgtaccgctgcttcgaggaccgcgacctcagcctcatcgagatcaatccg
ctgatcgtcaccgcggatgattcactgctggcgctggacgctaagatcaacgtcgatgac
aacgccatcgaggtcaaccgccagcccgagatcgccgacatgcgcgatctgagccaggag
gacgagaccgaggtgcaggccgccgagcacggcctcaactacatcaccctcgacggcaac
atcggctgcatggtcaacggcgcggggctcgccatggccaccatggatgtcatcaagctg
cacggcggcgagccggccaactttctggacgtgggcggcggcaccaataaggagcgcgtc
accgaggcgttcaagatcatctccgccagccccgatgtgcagggcattctggtgaatatc
ttcgggggcatcgtgcgctgcgacatgatcgccgagggcgtgatcgccgcggttaaggaa
gtgggggtcaacgtcccggtggtggtgcggctcgagggcaccaatgtcgagcagggcaaa
cagctgctcgctgaaagcggtctcgatatcatccccgccgatgacctgaccgacggcgca
gacaaggtggtcggcgcggtcagcgcctga
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