Serratia plymuthica AS9: SerAS9_3430
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Entry
SerAS9_3430 CDS
T01503
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr00270
Cysteine and methionine metabolism
srr01100
Metabolic pathways
Module
srr_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SerAS9_3430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_3430
03032 DNA replication proteins [BR:
srr03032
]
SerAS9_3430
03036 Chromosome and associated proteins [BR:
srr03036
]
SerAS9_3430
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
srr02048
]
SerAS9_3430
Enzymes [BR:
srr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SerAS9_3430
Transcription factors [BR:
srr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SerAS9_3430
DNA replication proteins [BR:
srr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SerAS9_3430
Chromosome and associated proteins [BR:
srr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SerAS9_3430
Prokaryotic defense system [BR:
srr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SerAS9_3430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
UPF0300
Motif
Other DBs
NCBI-ProteinID:
AEF46540
LinkDB
All DBs
Position
complement(3656100..3658088)
Genome browser
AA seq
662 aa
AA seq
DB search
MNRELIVDNFAGGGGASTGIEMATGRSVDIAINHDENAIAMHETNHPETLHYCESVFDID
PVAATAGQPVGLAWFSPDCRHFSKAKGSKPVKKEIRGLAWIVIRWALAKRPRVMMLENVE
EFKTWGPLLTAEDGTEHPDSTRAGETFAAFIGMLTTGVAADHPAIAECCEVLNIDAASDD
VRRLVAGLGYVVDHKELRACDFGAPTIRRRFFMVMRCDGKPVEWPVASHGDPKSLDVQSG
KLAPWRAAAECIDWSIPCPSIFERKKPLAENTLKRIARGIQRFVIDSSTPFIVKCNHTST
KTTYDCFRGQSLKDPLQTITKTHGYALVTPHVTKFRTGATGQECDEPLSTITAGSSDRPG
GNGHALGMVEAKLAPFIAGAGGSEYQAKPRSADQPMHTILKQSRAALIAPIIARIGQTGF
GGDRLAYETGKPLTTVTTKAEHLLVAPIIARQFGNSVGHRADEPNGTITAGGGGKSQLVA
TFLAKHFGGNYTGPGADLAEPAHTVTTVDHHALVTSNLIKFRGTCKDGQPVTEPMPTITA
GGLHIGEVRAFLLKYYGNEKEGVSLTDPLHTVTTNDRFGLVTVEGIDYQIVDIGMRMLQP
HELYAAQGFPSWYIIDQDYRGKRYAKDKQVARCGNAVPPPFAEALVRANLPELCVERKEV
AA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgaactgatagtagataattttgctggtggtggcggggcgagcaccggcatt
gagatggccactgggcgcagcgttgacattgcgatcaaccacgatgaaaacgccattgcg
atgcacgaaaccaaccaccccgagacgttgcactactgcgaatcggtctttgatatcgat
ccggtagcggcgaccgccgggcagccagttggcctggcatggtttagtccagattgccgt
catttctcaaaagcgaagggcagcaaaccggttaagaaggagattcgcggactggcctgg
attgtgatccgatgggcactggcgaagcgcccgcgcgtgatgatgctggagaacgtcgaa
gagtttaaaacgtggggcccgctgctgaccgccgaagacggaacagagcatccagattcg
acgcgggctggtgaaacctttgctgccttcattggcatgttaacaaccggcgttgctgca
gatcatccggcgattgctgagtgctgcgaggtgttaaacatcgatgcggccagcgacgat
gtgcgccgactggttgccggcctgggttacgttgtcgatcataaggaattacgcgcctgt
gatttcggcgcgccgactattcgccgccggttcttcatggtcatgcgctgcgacgggaag
ccggtcgagtggccagttgcgagccacggggatcctaaatcacttgatgtgcagagtggt
aagctcgctccgtggcgcgccgccgcagagtgtatcgactggtcaattccatgcccgagc
attttcgagcgcaaaaaaccgctggcagagaacaccctgaagcgcattgcgcgtggtatt
cagcgctttgtgatcgacagttctaccccgtttatcgtgaagtgcaaccacaccagcacc
aagacaacctatgactgtttccgtggccagtcgctgaaggatccattgcagacgatcaca
aagacccacggttatgcgctggttaccccgcacgtcacaaaattcagaaccggtgccacc
ggtcaagaatgtgatgaaccgctttccaccatcactgcaggtagttcggatcgcccgggt
ggcaatgggcatgctcttggaatggttgaggcaaaactggctccgtttattgctggtgcc
ggcggctctgaataccaggcaaaaccacgcagcgcagatcagccgatgcacaccatcctg
aagcaatcgagggctgcattgattgcgccgatcatcgcgcgtatcggtcagacaggtttc
ggcggcgaccgcctggcctatgaaacaggcaagccactgacgaccgtcaccacgaaagca
gagcatcttcttgtggccccaatcattgcccgccaatttggcaatagcgtcggtcatcgc
gctgacgagccaaatggcacgatcactgcgggcggcggtggcaaaagccaactggttgca
acattcctggcgaaacacttcggcggcaattacaccggccccggcgctgatcttgctgaa
ccggcgcacacagtgacgactgtcgaccaccatgctctggttacgtcaaacctgatcaaa
ttccgtggtacctgcaaggatggccagccggtgactgagcccatgccaaccattaccgcc
ggcggcctgcatattggtgaggttagggcattcctgctgaagtattacggcaacgaaaag
gaaggggttagcctcacagatccgctgcacaccgtcaccacgaatgaccgtttcggcctt
gtcactgtagaaggcatcgattaccagatcgttgatatcggtatgcgtatgttgcagccg
cacgaactgtacgctgcccagggatttccgtcctggtacatcatcgatcaggactatcgt
ggcaagaggtacgccaaggataagcaggtagcacgctgtggtaacgctgtgccgccacca
tttgcagaggcgctggtgcgtgccaacttgccagagctgtgcgttgagcgcaaggaggtg
gccgcgtga
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