Streptomyces rutgersensis: F0345_11640
Help
Entry
F0345_11640 CDS
T08623
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug00860
Porphyrin metabolism
srug01100
Metabolic pathways
srug01110
Biosynthesis of secondary metabolites
srug01120
Microbial metabolism in diverse environments
srug01240
Biosynthesis of cofactors
Module
srug_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
srug_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
F0345_11640 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srug04147
]
F0345_11640 (hemB)
Enzymes [BR:
srug01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
F0345_11640 (hemB)
Exosome [BR:
srug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
F0345_11640 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF5707
Mob_Pre
Motif
Other DBs
NCBI-ProteinID:
QNE81691
UniProt:
A0A7G7C275
LinkDB
All DBs
Position
complement(2776435..2777427)
Genome browser
AA seq
330 aa
AA seq
DB search
MSAYGTFPGSRPRRLRSSAVMRRMVAETRLHPADLVLPAFVREDISEPVEIGSMPGVYQH
TRDTLRKAAAEAVAAGISGIMLFGVPEEAKKDALGTAGTDPDGILQQALRDVRSEVGDDL
LVMSDLCLDEFTDHGHCGVLTADGRVDNDATLERYAEMAQVQADAGAHVVGPSGMMDGQI
GVVRDALDRTGHEDVAVLAYTAKYSSAFYGPFREAVGSSLKGDRKTYQQDAANARESLRE
LALDLSEGADMVMVKPAGPYLDILAKVAEASDVPVAAYQISGEYAMIEAAAQRGWIDRDP
AVLESLTGIKRAGAQIILTYWATEVARKLG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcgtacggaacgttccccgggagccgcccccgcaggctgcggagcagtgcggtg
atgcgccggatggtcgccgagacccggctccacccggccgacctggtcctgcccgccttc
gtccgcgaggacatctccgagccggtcgagatcggctccatgcccggcgtgtaccagcac
acccgtgacaccctccgcaaggccgccgccgaggccgtggccgccggcatctccgggatc
atgctcttcggcgtgcccgaggaggccaagaaggacgcgctcggcacggccggcaccgac
cccgacggcatcctccagcaggcgctgcgcgacgtccgctccgaggtcggcgacgacctg
ctggtcatgtccgacctctgcctcgacgagttcaccgaccacgggcactgcggcgtcctc
accgccgacggccgcgtcgacaacgacgccaccctggagcgttacgccgagatggcccag
gtccaggccgacgccggtgcccacgtggtcggccccagcggcatgatggacggccagatc
ggcgtcgtccgcgacgccctcgaccggacgggccacgaggacgtcgccgtcctcgcctac
accgccaagtactcctcggccttctacggccccttccgcgaggccgtcggctcctccctg
aagggcgaccgcaagacctaccagcaggacgccgccaacgcccgcgaatccctccgcgag
ctcgccctcgacctctcggagggcgccgacatggtcatggtcaagcccgccggcccctac
ctcgacatcctcgccaaggtcgccgaggcctccgacgtccccgtcgccgcgtaccagatc
agtggcgagtacgcgatgatcgaggccgccgcccaacgcggctggatcgaccgcgacccg
gccgtcctggagtccctgaccgggatcaagcgggccggggcgcagatcatcctgacgtac
tgggcgaccgaggtggcgcggaagctggggtga
DBGET
integrated database retrieval system
