Sinocyclocheilus rhinocerous: 107712697
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Entry
107712697 CDS
T04916
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107712697
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107712697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107712697
NCBI-ProteinID:
XP_016373507
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MRALPLVLICVLSAASAQEPDLAHGCTHGSCYPATGDLLVGRETNLKAASTCGLRRREPY
CIVSHLQEEKKCFHCDSRRPYDPYSNPVSHRIENVITTFKPHRKKSWWQSENGKSDVYLQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFTFDCESTFPGISQGPLRK
VDDIICESRYSDIEPSTEGEVIYRVLDPAIQIEDPYSPNIQNQLKITNLRLNLTKLHTLG
DNLLDSRTEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGIRDDIEGMVHGRCVCKHNT
KGLNCEQCDGFYNDLPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNVSGGVCDN
CLHNTMGRNCETCKPFYYQDPTRDIRDPGVCVACDCDPDGSLNGGICDGHDDPSLGMISG
QCRCKDNVEGPRCDKCKPGFFGLSAGDPRGCQPCKCDPRGMVSGSSQCDPVTGDCFCKRL
VTGHSCNQCLPEHWALSHDASGCRGCDCDVGGATDNQCSMETGQCHCRSHMIGRQCNQVK
SGYFFMALDHYIYEAENAKLGQDSVFEEREYQPGRPVSWTGTGFARAPEGGTLEFAINNI
PYSMEYDILIRYELQMPRDWEEVHVMVIRPGPIPTSSPCGNTIPADDLLTVSLPSGARFV
VLPQPVCLERGVSYKLRVEFIRYADRNSIISLTNAFVLVDSIALLPRYSSLEMFTAGDPA
SVTRKQSYERYRYHETAKSVSRPQMSEVCAKLITSMSALINDGTLPCECDPQGSLSSECD
VRGGQCRCRPNVSGRRCDKCAPGAYGFGPSVCKLCECSLEGSQSRFCDQYSGQCLCRAGA
FGQRCDGCQAGHWGFPNCRPCECNGHADECHQRTGACINCRSNTAGDKCDRCANGYYGNP
TLGLGSQCRPCPCPEGPDSGRHFAASCYQDNRNQQVVCNCNQGYTGPRCDECAPGYYGDP
SKIGGRCQPCRCSNNIDLSDPEACDKCTGQCLKCLYNTEGPDCGVCKSGYYGDASRRNCR
KCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPHVIGQTCDHCAPKYWNLASGQGCEPCG
CDPNNAYTSACNEFTGQCQCRVGFGGKTCKDCQENHWGDPRVLCRACDCDPQGIESSQCT
RVTGHCECKQGVSGVRCDQCARGFSGTFPDCKPCHQCFGDWDRIVQDLATRTKVLTDRAK
ELQTTGLTRAFERKFKELEDMLAQARDIVNARNATAEAVTTLMGMIEDLRAQIGETTDTL
NQLEGDLTAVQDSNYEASNALSTLEREAKELKLNSDQLNRQLDILKNSNFLGAYDGIRAS
YNKSRDAEHRTNRSTTDIPSTVSQSADTRKKTERLIAQKRDNFNRKNAANKRTLTDLNAK
AQNLDIKKINEKICGAPGDAPCVDSPCGGAGCRDDEGKRHCGGLNCNGAVAVANNALDRS
KHAEKELDKAMGVVEELFKQVADAKTKAQEAKDKAQAALEKASDTKNKVEHSNNDLRDLI
KQIRDFLMQEGADPDSIEAVANRVLELSIPASPRQIQHLADEIKDRVKSLSNVDAILEQT
QNDVLKAEKLLLDAKKARNKAEGVKNTAESVKKALNDAGRAQAAAEKAIQKAKNYIGLTQ
NRLAQIQSETTARERDLNDAMDRLGDLGRQIEALKTKRANNSLDAARAEETATMARDKAN
EAKEILDGELSDKYRTVQGLMENKAKTIRDAKQKAELLRDESKELLKDAQYKLQRLAELE
KDYEENQKVLEGKARQLDGLEDKMKAILNAINKQIQIYNTCQ
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcttcccttagtgttgatctgtgtcctgtcagcggccagtgcacaggagcct
gatcttgcccacggctgtacccatggaagctgttaccctgcaactggtgacctcttggtg
ggtcgagagacgaacttgaaagctgcatccacctgtggcttacggaggagagaaccctac
tgcattgtcagccatctgcaggaagagaagaagtgtttccactgtgattcacggcgacct
tatgatccttattccaaccccgtgagtcaccgcatcgaaaatgtaatcaccaccttcaaa
ccgcaccgcaagaagtcctggtggcagtctgagaatgggaagtctgacgtttatcttcag
ctggacctggaggcagagtttcactttactcatctcatcatgacttttaagacgttccgt
ccagcggccatgttgattgagcgatccgcagattttggccgaacctggcaggtgtaccgt
tacttcaccttcgactgtgagtccaccttcccgggaatttcccaaggtccacttcgtaag
gttgatgatattatctgcgagtccagatattctgacattgagccatcgacagaaggagag
gtgatttatcgtgttcttgaccctgctatccagatcgaagacccttacagccctaacatt
cagaaccagctgaagatcactaatctccgtctgaacttaaccaagctgcacactctgggt
gataacctgctggactcacgaactgagatcaaagagaaatattactatgccatatatgag
ctggttgtcaggggcaactgcttctgctatggccacgcctctgaatgtgctcctattgat
ggcatcagggatgacattgagggcatggtacacgggaggtgtgtgtgcaaacacaacacc
aaaggactgaactgtgaacagtgtgatggcttctataatgacctgccctggagaccagct
gagggccgtaatactaacgcctgcaagaaatgcaactgtaacggtcactccaaccagtgt
cactttgacatggcggtctatctggctacggggaacgtcagtggaggtgtgtgtgacaac
tgtctccacaacaccatgggccgcaattgtgagacctgtaaaccgttttactatcaggat
ccaactcgagacatcagagaccctggagtctgcgtggcctgtgactgtgacccagatgga
tctttgaatggaggcatttgtgacgggcatgatgacccctctctgggcatgatctctggg
cagtgccgctgtaaagacaacgttgaaggcccacgctgtgataaatgcaagcctggtttc
tttgggctcagtgctggtgatcctcgtggctgccaaccatgtaaatgtgaccccaggggt
atggtgtcgggtagctcccaatgcgaccctgttaccggagactgcttctgtaaacgcctc
gtcactggacacagctgcaaccaatgtctacctgagcactgggccctgagtcatgatgcc
agtggctgcagaggttgtgactgtgatgtgggtggagctacagacaaccaatgctcaatg
gaaacagggcagtgtcactgtcggagtcatatgattggtcgccaatgtaaccaagtgaag
tctgggtattttttcatggccctcgaccactacatctatgaggctgaaaatgccaaactg
ggtcaagactctgtgtttgaggagagagagtaccagccgggccgtcccgtctcgtggaca
ggcactgggtttgcacgggctcctgaaggtggtacattggagttcgccattaacaacatt
ccatattctatggaatatgacatcctcattcgctatgagcttcagatgccacgggactgg
gaggaggtccatgtaatggttatcagacctggccccatacctaccagcagtccatgtgga
aataccatccctgcagatgatctgctgaccgtatcgctcccatctggtgccaggtttgtg
gttctgcctcagccggtgtgtttggagagaggagtgagttacaaactgcgtgtggagttc
atccgttatgctgacaggaacagcataatttccttgactaatgcctttgtacttgttgac
tctattgcccttctccctcgttactcttctctagagatgtttactgcgggagaccccgcc
tccgtcacacggaagcagagctatgagcgataccgctaccacgagactgccaagagtgtg
tcccgtccacagatgagtgaagtgtgtgctaaactcatcaccagcatgtctgcacttatt
aacgacggcacgctgccttgtgagtgcgatcctcagggttcgctcagctctgagtgtgat
gtccgtgggggtcagtgccgctgcaggcccaacgtatcaggccggcgctgtgataaatgt
gcaccaggagcttacggctttggcccttccgtatgcaaactttgtgaatgtagtttggag
ggctcccagagccgattctgtgaccagtactcaggacagtgtctatgccgggctggtgca
tttggtcagcgctgtgatggttgtcaggctggacactggggcttcccaaactgcaggccg
tgtgaatgtaacggacatgctgacgagtgccaccagaggactggagcctgtatcaactgt
agaagcaatacagccggggacaaatgtgacaggtgtgctaatggttactatggaaacccg
acacttggtttagggagtcagtgtcggccctgcccctgtcctgagggccccgacagcggc
cgtcactttgctgcctcttgttaccaagacaaccgcaaccaacaggtggtctgcaactgc
aaccagggttacacaggtccacgttgtgacgaatgtgctccgggttattacggcgacccc
tctaagatcggtggacggtgccaaccttgtcgttgcagtaacaacattgacctatcagat
cctgaggcatgtgacaaatgtactggccagtgtctcaagtgcctgtacaacaccgaagga
ccggactgtggtgtgtgcaagagcggatactatggagatgcttcccgccgcaactgccgg
aagtgcacctgcaacttcttgggcacagagcgcagtcagtgtctgtctcgagatgactgt
gtgtgccagcgtgccacaggacagtgtcaatgtctgcctcatgttattggacaaacctgt
gatcactgtgctcccaaatactggaacctggcgagtggacaaggctgtgagccctgtggc
tgtgaccccaacaacgcctacacatctgcctgtaatgagttcacaggtcagtgccagtgc
cgtgttgggtttggagggaagacctgtaaagactgccaggagaaccactggggtgaccca
agagtactgtgccgagcatgtgactgcgacccccagggcatcgagtcatctcagtgcacc
cgtgtgactggtcattgcgagtgcaagcagggagtttctggcgtccgctgtgatcaatgt
gcccgtggtttctctggcaccttccctgactgcaagccttgccaccagtgctttggggac
tgggaccgcatcgttcaggatctggcaaccagaactaaagtgctcacagatcgagccaag
gagcttcagactactggcttgacccgagccttcgagagaaaatttaaggagttggaggac
atgctggcacaggcgagggacattgttaatgcccgcaatgccactgctgaggctgtgacc
actctgatgggcatgatcgaggatctcagagctcagatcggtgagaccacggacacactg
aaccagctggaaggagacctgaccgctgtgcaggacagtaactatgaggccagtaatgca
ttaagtaccctggagagagaagcaaaagaactcaaactgaactcagatcagcttaaccgt
cagcttgacatcctcaagaactctaacttcttgggtgcatatgacggcatccgggcctcg
tacaacaagtcacgtgatgcagagcaccgcaccaacagatctaccactgacattcccagc
acagtgagccaatcggcagacacccgtaagaaaacagagcgactcattgcccaaaagaga
gacaattttaaccgcaaaaatgctgccaacaaacggacgctcacagacttaaatgctaaa
gctcagaatttggatataaagaaaatcaatgaaaagatatgtggagcaccgggtgacgct
ccatgcgtggacagtccttgtggcggtgctggttgtcgtgatgatgaaggcaagcgccac
tgtggtggcctgaattgcaatggagccgttgcagtggccaacaatgccctggatagatcc
aagcatgcagaaaaagagttggataaagctatgggagtagtggaagagctttttaagcag
gtggcagatgctaagaccaaggctcaggaagctaaggataaagcccaggcagctttggaa
aaagctagtgataccaaaaataaggtggaacattctaacaacgacctgagggacctcatc
aaacaaattcgggatttcctcatgcaggagggggcagatcctgacagcattgaggcggtg
gccaatcgggtgctggagctgtcaatccctgcttctcccaggcagattcaacacctcgca
gatgagattaaagaccgtgtcaagagcctgtccaatgtggacgccattctggaacagacc
cagaatgacgtcctcaaagcagaaaagctgctgctggatgccaagaaagccaggaataag
gcagaaggagtaaagaacacagctgagagtgtgaaaaaggccctgaacgacgccggccgg
gctcaggcagctgcagaaaaggccattcagaaagctaaaaattacatcggcttaactcag
aaccgactagcacagatccaatcagagaccacagctcgtgagagggatcttaatgatgct
atggacaggctgggagatctggggcgccaaatagaggccttaaaaaccaaacgtgccaac
aacagcctggacgcagcacgggcagaggagacggccaccatggcccgcgacaaggccaat
gaagctaaagagatcctggacggtgagctgtccgataagtatcgtactgttcagggtctg
atggaaaataaggcgaagacaatacgggacgctaagcagaaagcagagctcctgagagat
gaatccaaggagctgctaaaggatgcccagtataaactgcagaggctggcagagctagaa
aaggactatgaggaaaaccagaaggtattggaaggaaaagccaggcagctggatggcctg
gaagataaaatgaaggcaatcctgaatgccatcaataagcagattcagatctacaacacc
tgtcaataa
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