Sinocyclocheilus rhinocerous: 107722186
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Entry
107722186 CDS
T04916
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04020
Calcium signaling pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107722186
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107722186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107722186
Ion channels [BR:
srx04040
]
Ligand-gated channels
Glutamate (ionotropic)
107722186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
107722186
NCBI-ProteinID:
XP_016385924
UniProt:
A0A673J023
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MATPQGCWGSSLQLLLFFHLLLNVVPLCRGRPFFGPPSVNVAVVFSGLAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIIGISGGSAVVIPHKAEGSTFLQMGASIEQQINAMFKVMEEYNWGNFVVITSLY
PGYENFVDYIHSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLLGPGYIWAIPSLTVGNPEVPPPDSFPVGVISIITDSWRKTLRQRVRE
GVAVIVKAVHSFHKYRGFIPEGHSDCNSPVKSYTNNSLFRHMLNVSWEHKDLSFNVDGYL
TNPSMVIVALDRERHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESVTGHTEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVCAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVRKSDHLDFLLAISRGIYSCFNGVEDIGRSTSIQNPDITANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWSRHSGSLPARIPLVTTTEKVPGHFSYITN
LTENHIPHMQRSITPPFTQHTKTTSPPPMVNHRVLTRPTPLRYTLPARTRGLYDGMLPVS
SLSTPHLAMHDSPSDLTRLGSSFVPYRDIYTEHHKPCHSDFSDAVRRKKRPQNLMVESMD
LRGLHDYKDQSTCHNEANRFAENYLSSSFSENPFVAADTACNSCVKMYFDSAFDGIPLIG
KRKLHRRPSFLKATWGPDRVRFPGDRPTASPQVTIPDLFPCVDVHGQVRNTLCYGQPMDH
NYLHTFQRNSRKSQKFRHSQSTRLPSYKEAIFHNVAAVRRASSLVHRPYSYPELPVYQSP
LSYGPAELCNIFPCMGHPSDSVYGGYRAPAHLHNDHLVPVPGSRLVHSSPVVPMTWGRIS
SLESKV
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcaagggtgttggggttcctctcttcaactcctcctcttctttcatctg
ttactcaatgtagtgcctctctgccggggacgtccattcttcggccctccttcggtcaac
gtggctgtggttttcagtggtttggcccaccacagtgagatcaagggccgtctgagtcca
gaaaacttcctagacatgcccctggaagtgaaccccatcaccgtgttggtgaatgacact
aaccccagggctttactcacacgtctctgtcagactatggctgcagagagcctccacgga
gtggtgtttgaagatgacgtggactcagaagctgtggcacaaatcttagactttatctcc
tctcagacgtccatccccatcataggcatcagtggaggttctgcagtagtcatcccacat
aaggctgaaggttctacctttctccagatgggagcttctatagagcagcagataaatgca
atgttcaaagtgatggaggagtacaactggggtaattttgtagtgatcaccagcttgtat
cctggctacgagaacttcgtggactacatccactccttcacggacaccagttacttcctg
tgggagctgcaggatgtgctgagcttcgagatgtccgtgggggccaatgacatccgcaca
cgtagactactacagcaggtggactcgcaggtatatctagtgtactgttcccatgaggaa
gcacagtacttgttcagaatggcctctgatgtagggctgctagggcccggatacatctgg
gccatccccagtctgactgtggggaaccctgaagtgccccctcctgacagtttcccagtg
ggcgtcatcagtattatcacagacagctggaggaaaacactgcgccagagggttcgggaa
ggagtcgcagtcatagtaaaagcggtgcacagtttccacaagtacagaggattcattccc
gagggtcacagtgactgcaatagtccggtcaaatcgtacaccaacaattctctcttcaga
catatgctaaatgtgtcatgggagcataaggacctctccttcaatgttgatggctatctc
actaatccttccatggtgatcgttgctttggatcgagagagacactgggacaaggtagga
agctacgagggagggattttgcagatgcgataccctgtatggccccgttacggcagcttc
ctggagcccgtgtctgacaaccgccacctgactgtggccacattggaggagaggcctttt
gtcatcgtggagagtgttgatcctgccacgggcacttgtgtgcgcaatactgtgccgtgt
cgtcggcagtccaacaggactgaaagtgtaacaggacacactgagccttacaccaaactc
tgctgcaaaggtttctgcatagacatcctaaagaagctctcacgcaccatcaagttttca
tacgacctttatctggtcaccaatgggaaacatggcaagatggtccgtggcgtctggaat
gggatgattggagaggtcttctacaagcgtgcagatatggcaattggctctcttaccatc
aatgaggagcgatcagagattgttgacttttcagtgccgttcgtggagactgggattagt
gttatggtggccagaagcaatggaacagtctcaccttctgccttcctggagccttacagt
ccagccgtgtgggttatgatgttcgtaatgtgcctgactgttgtggcagtcaccgtgttt
gtgtttgagtacttcagccctgttgggtacaaccggagccttgtctgtgccaaagcccct
gggggtccaaccttcaccattgggaagtctgtctggctcctgtggggaatcgtcttcaat
aactctgttcctattgaaaaccccaaaggcacgaccagcaaaattatggtcctggtctgg
gctttttttgctgtcatcttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtacattgacactgtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcgcttcgggaccgtcccaaacggcagcacagagaggaacatt
cggagcaattaccctgacatgcacacccacatgataaaatacaaccagaagggagtggag
gaagctctcaacagccttaagacagggaagttggacgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggacgagggctgcaagctggtcaccattggtagtgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctggccctcctccagttcctgggagatggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaacgaggtcatgagctccaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggctatgggtctcagcctgctggtc
tttgcttgggaacatttactttactggaaactgaggcactctgtccgcaagtctgatcat
ttagacttcctgctggccattagcaggggcatatacagctgctttaatggcgttgaagat
attggcagatctaccagcatacagaatccagatatcacggccaattacgcccaggccaac
atgctgaaaatgctgcagacagccaaggacattgtctcctcagccaaagtggaaaactca
ttggataatgctaccaagaccattgagaactggagcagacacagcggcagcctgccagca
cgtatcccactggtgaccacgactgaaaaagttcctggtcacttctcttatattactaac
ctcacagagaaccacatacctcacatgcagcgttccataactccacctttcacgcaacac
accaaaaccactagcccaccaccaatggtaaaccacagagtcttaacacggcccactcct
cttcgctacacgcttcccgccaggacaaggggtctttatgacggtatgcttcctgtgtcc
agtctgagcacacctcatctagccatgcatgattctccatccgacctaacccgtcttgga
tcttcctttgttccatatagagacatctacactgaacaccataagccttgtcacagcgat
ttctcagatgccgtcaggcgaaaaaagagaccccagaatctcatggtggagtccatggat
ctgagggggcttcacgattataaagaccaatcaacgtgtcataatgaagcaaaccgtttt
gctgaaaactacctgtcctcatccttcagcgaaaatcctttcgtagcagcggacacagct
tgtaattcctgtgtcaaaatgtactttgactctgcttttgatggcatacctttgataggg
aaaaggaagcttcatcgcagaccttcattcctgaaagccacttggggccccgacagagtc
cggttcccaggtgacagacccaccgcctccccacaagtaactatacctgacctgttccct
tgcgtggatgtacacggacaggtgaggaacaccctgtgttacggccaaccgatggatcac
aactaccttcacaccttccagcgaaactccaggaaaagtcagaagttcagacacagccag
tccacaaggcttccctcctacaaggaggcgattttccacaatgtggcagctgtcagaagg
gcgtccagtttggtacatagaccctactcctacccagagctaccagtctaccagagccca
ctgtcatatggacctgccgaattatgcaacatcttcccctgcatgggacatcccagtgac
agtgtatatggagggtatagggcacccgcacacctacacaatgaccatctagtgcctgtt
ccaggcagcaggttggttcatagcagtcctgttgtgcccatgacatggggcagaatttcc
agtctggaatcaaaggtgtga
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