Sinocyclocheilus rhinocerous: 107722429
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Entry
107722429 CDS
T04916
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107722429 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107722429 (polr1a)
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107722429 (polr1a)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107722429 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
107722429
NCBI-ProteinID:
XP_016386276
UniProt:
A0A673LM84
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSSDEIRKLSVKSITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDYTSCPGHFGHVDLPLPVYNPMFFDKLYLLIRGSCLSCHMLKCPRTAVHLL
LGQLKLLDVGAMKEVYELENVLNQLVEANAQPSGIEIQEALEAFITPILTASEDQQHTAP
IKHICEKKSSLINSFWRVYMGPRKCPNCRASRVTVRREHNSKLIVTHGSSTASTEKDDDS
LITKRGFLTPSLAREHVIKLWEKEGFFLKHLFSGFDMNSSEKGFSPEVFFLELLVVPPCR
YRPVNRLGDQMFTNGQTVNLQAVLKDNFMIQKLLALIAAEKTDATEEMEQSSESTEISQI
DQSFLTGIQGLTLTDKLYNMWIRLQSHANIVFDSDMDKLMTEKFPGVRQLLEKKEGLFRK
HMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPSV
HPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHRIPMKIVNRHIKNGDVLLLN
RQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTL
VSTDQQYLVPKDGKPLAGLIQDHMVSGASMTIRGCFFTRDQYTALVYRGLTDKIGRVKLL
PPALFKPVPLWTGKQVVSTLLLNVIPENGIPLNLMGKAKIPSKAWVKEPPRAVPGYRPET
MCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQL
YRGFTLGVEDILVKDGANKQRRKIIRKSVTCGSKALQAAFNLPAAAGVTEARERWQDAHL
NTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQ
ISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFHCMAG
REGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQF
LQPQQFPFIKDNYEVIRKSKCLDEVLAKMDTGATFSHFKAIKKWKAKRERVSPRDGAFLL
YSQKKLSKLKSQVENQTLANGREPAILQLLENWRALDESGRMRYLKKTSHCPDPCLALYR
PDICFGSVSETFDSIVESYLDQFSVKQEFQTSEITDTDRLRHLLQLKWQRALCDPGEAVG
LLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSIPVLMNK
KALKRVKTLRKKITRVCLSEVLHKVDVIETFRSVEKRSQKSRVFKLAFHFLPPERYQQDK
LLTPNEILHFMEQKFFRMLLEAIKKLSAKLAAVNVVDTRKATANDNDRGAGGIADKEDDG
DEDAENNRIVDDEANEGDADATDSRRKEKQEEEVDYESEEGEEAGDELEDVAEDRQEEAD
TQENSEEGSGGSQPADQTQSPDISEELEGASQDSMRISTVLQLGSAIEDYKHDTKNGLWC
ELTLVLPLTKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTTKEGKKEMVLNTEGINM
HEMFRHADILDLNRLYSNEVHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVA
DYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDNGGVSIPSCTAV
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacgccatggaggcgattagaaggcatgtcgtttggtttgttc
tcctccgatgaaataaggaagctgagtgtgaaaagtatcactaattcccagctgttggat
aatgtgggcaatgccgctgcaaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagactacaccagctgtcctggccactttggtcat
gtagatctgccccttcccgtctacaaccctatgttttttgataaattatatttgctcatc
cggggttcatgcctgtcatgccatatgttgaagtgtccgagaacggctgttcatttgctg
ctgggccagctgaagctcctggacgtgggtgcgatgaaggaggtgtatgagctagagaac
gttctcaatcagttggtggaggccaatgctcagccgtctggaatagaaatccaagaagct
ctggaggcgttcattacacccatcctaacagccagtgaagaccagcagcacactgcccct
atcaaacatatctgtgagaaaaagtccagtctcattaacagtttctggagagtatacatg
ggcccgaggaaatgtccgaattgcagagccagtagagtgactgtgcgcagagaacacaac
agcaaactcatcgtcacacatggatcatccacagcaagcacagaaaaggacgatgattca
ctgattaccaaacgtggattcttgactccaagtttggcgcgagaacacgtcatcaaactc
tgggagaaagaaggtttcttcctgaagcatctgttctcagggtttgacatgaatagttcg
gagaaaggcttcagtcctgaagttttctttttggagttgcttgtggttcctccgtgcagg
tacagacctgttaaccgtttgggagaccagatgttcaccaacggacagactgtgaacctg
caggccgtgttaaaggataatttcatgattcagaaactgctcgcactgatcgctgctgag
aagaccgacgctactgaagagatggagcagtccagcgaatccacagagatcagtcaaata
gatcagagcttcttaacgggcatccaagggctgactctcacagacaagctctataacatg
tggattcgcctgcagagtcacgccaacattgtgtttgacagcgacatggacaagctgatg
actgagaagttcccaggtgtccgtcagctcttggagaagaaagagggtttgttcaggaag
cacatgatgggaaagcgtgtggattacgctgcacgctcggtcatttgtcctgatatgtac
atcggaaccaatgagattggaataccaatggtttttgctaccaagttgacatacccacag
ccagtgacaccctggaacgtgaaggaactcaggcaggcagtgctgaatggacccagcgtc
caccctggagcctccatggtcattaatgaagacgggtcccgaaccattctcagcagcagc
aacctgacccagagagaagccgtggccaaacagctcctgacccccagcaccggccagcac
aggatacccatgaagattgtaaatcggcacatcaagaatggggatgtgctgctgcttaac
cgtcagcccactctccacagaccatcaattcaggcccactgtgctcgcatcctgcccgga
gagaaagtgctcagactacattacgccaactgtaaggcctacaatgctgactttgatggt
gacgagatgaacgctcacttccctcagagtgagctgggcagagctgaggcctacacgcta
gtgagcacagaccagcagtacttggtgcctaaagatgggaagccattggccggcctgatt
caggaccacatggtgtctggcgccagcatgaccatccgtggctgttttttcacacgggat
cagtacactgcactagtctacagaggcctgacggacaagatcggcagagtgaagctcctg
cctcccgcgctctttaaacccgtgcctctctggacaggaaagcaggtggtgtcgaccctt
ttgctgaatgtcatcccagaaaacggcatccctttaaacttgatgggaaaagcaaagatt
cccagtaaagcctgggtgaaggaaccccccagagctgttccaggatacaggcccgaaact
atgtgtgaatctcaggtggtcattcgtcagggagagctcttgctgggagttctggataaa
gctcactatggcagctcagcgtacggtttggtccactgctgctacgagctctacggagga
gagaccagcggcaaactgctcagctgtctggcacgactcttcactgcctacctgcagctt
taccgcggtttcaccttgggtgtggaagacattctagtaaaagatggagccaacaaacag
agaaggaaaattatccgaaagtcagtcacgtgtggctccaaggctctccaggctgcattt
aacctgcctgcggctgctggagtcactgaagccagagaacgctggcaagacgctcatctg
aacacagaccagagagatttcaacatggtggacctgaagtttaaagaggaggtcaatcaa
gtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccaccgctccttcccagaa
aacaacctacagctgatggtgcagtcaggagccaagggttcgactgttaatactatgcag
atctcctgtttattgggtcagattgagctggagggccgccgaccgccactgatgccttct
gggaagtccctgccctgctttcagccctatgaaccccagccgcgatccggaggattcgta
actggcagattcttgacgggaatcaaacctcctgagttctttttccattgtatggctggt
cgtgaaggtcttgtggacactgctgtcaaaaccagtcgatctggttatttgcagaggtgt
gtgatcaagcatctagaaggtctggtggtccagtatgatctgactgttcgagacagtgat
ggaagtgtggtccagtttctttacggagaggatgggctggacatccccaagacccagttc
ctacagccgcagcagttccctttcatcaaagacaactacgaggttatcagaaagtcaaag
tgtttggatgaagttctggctaaaatggacacaggggcaacatttagtcactttaaggcc
atcaagaaatggaaagccaaacgtgaacgtgtttcacccagagacggtgccttcctgctc
tactcgcagaagaaactgagcaagttgaagtctcaagtagaaaaccagacactggccaat
gggagagagccagccattcttcagctcttggagaattggagagctctggatgagtctggc
cgtatgaggtatttaaagaagacgtctcattgtccagacccgtgtctggctctttaccgg
ccggacatctgcttcggttcagtttctgagacgtttgactccattgttgagtcctacctg
gatcagttcagtgtcaagcaggaatttcagacctctgaaatcactgacacagatagattg
aggcatctcctgcagctgaagtggcagcgcgctctgtgtgaccccggagaggccgtgggt
ctgctggcagctcagagcattggcgaaccatccacacaaatgaccctcaacaccttccac
ttcgccggcagaggagagatgaatgtcaccctgggtataccaagattaagagaaatactc
atggttgcgagctctaacatcaaaacccctatgatgagcattcctgttctgatgaacaag
aaagccttgaaacgtgttaagacgctgcggaagaagataacgcgcgtgtgtttgtcagag
gtgcttcacaaagtggatgtgatagaaactttccgctcggtagagaaacggagccagaag
tcacgagttttcaaactcgcattccacttcctgccccctgagcgataccagcaagacaag
cttctcacccctaatgagattcttcatttcatggagcagaaattctttcgcatgctgctg
gaggccattaagaagctgagtgctaaactggcggctgtcaatgtggttgatacacgcaaa
gccacggcaaatgacaatgatcgaggtgccggtggcatcgcggacaaagaggatgatggc
gatgaggatgcagaaaacaacaggattgtggatgatgaggcaaatgaaggtgatgctgat
gccacagattccaggagaaaagaaaaacaagaagaggaggtagactatgagagtgaggag
ggagaggaggccggtgatgagctagaggatgtggctgaggacagacaggaagaggcagat
actcaggagaactctgaggaagggtctggtggaagccaaccagcagaccagacccagagt
cctgacatctctgaagagctggagggagcttcacaagactccatgaggatcagcactgtg
cttcagttgggctccgccattgaggactacaaacatgacaccaaaaatgggctatggtgt
gagctaaccctggtcctaccactcactaaagtgcactttgacctcacgtcagtggtggtg
aagcaggctcagaacgctgtcatcatggagaccaagggtatcacacgctgcttattaaat
gaagtcaccacaaaggagggcaaaaaagagatggtgctcaacacagaaggcatcaacatg
catgagatgttcagacatgctgatatcctggacttgaaccggttatactccaacgaggtt
catgctatggccaacacgtatggtattgaggtggccctcagagtcattgagaaggagatt
aaagatgtgtttgctgtctatggtattgaggtggacccacgccatctctctctagtagct
gactacatgtgtttcgagggggtgtacaagcctctaaacagatttggcattcaatccaac
agctccccgctgcaacagatgacctttgagaccagttacaagtttttaaagcaagcaacg
atgctgggttcttatgacaatggaggagtcagtatcccgtcatgcaccgctgtttga
DBGET
integrated database retrieval system
