Sinocyclocheilus rhinocerous: 107739670
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Entry
107739670 CDS
T04916
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04020
Calcium signaling pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107739670
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107739670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107739670
Ion channels [BR:
srx04040
]
Ligand-gated channels
Glutamate (ionotropic)
107739670
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
107739670
NCBI-ProteinID:
XP_016407330
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTTLDGTCKEEYTPNGVLIKKVICTGPNETIPGNTSGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAD
SDPKKKPSFRSISTTLASSIKRRRSSKDTVRRLRNGISFYSAGLSSSFCVCLSLVLFFRS
SLCIYFLLS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttattctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacatcggggccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggtcactcaggcgaaccaggtgtacggaagggataaattcaagttgaccgccatc
tctgtcactcacaaagcgaatgcgattcagatggcgctgtctgtgtgtgaggatctcatt
tccagtcaggtgtacgccatcctggtgagccatccaccacagtccaatgaccatctgacg
cccactccggtctcctacaccgcagggttttaccgaatacctgtagtagggcttaccacc
aggatgtccatttactcagacaagagcatccatctctcattcctccgcacagttccaccc
tattcccaccaggcacatgtgtggtttgacatgatgcgggagttccgctggaatcacatc
attctaatcgtcagtgacgaccatgaaggcagagcggcacagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tatgacaacaagagaggacctaaggccgagaaagtgcttcaattcaaccaagagactaac
ttaactgccctgcttctggaggccaaagagctggaggcccgagtgatcattctctctgcc
agcgaggaagatgcagccgccgtgtacaaaacagcacgcttcctcaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gacgggctgattggcctccagctcatcaatggcaagaatgaatcggcgcacatcagtgat
gccgttgctgtcgtagcccagtccatccaagagctctttgagaaagagaacatcacagaa
cctccaaggggctgcgtaggcaataccaacatctggaagaccgggccactttttaaaagg
gtactgatgtcttccaagtacccagagggcctaacaggacgcgttgagttcaatgatgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataaacagaggaagattatttggcct
ggaggtgaaacagaaagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactacgcttgacgggacctgcaaggaa
gagtacacacctaatggggtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggtaacacatcaggacgcccaattgttccccagtgttgctacggattttgcgtt
gaccttctgatcaaattggcaatgaccatgaacttcacctatgaagtacacctggtggca
gatgggaaattcggaacacaagaaagggtaaataacagtaacaagaaggaatggaatggt
atgatgggcgagctcctgggtggccttgctgatatgatcgttgcacccttgacgatcaac
aatgaacgagcccagtacatagaattctccaagcctttcaaataccagggactgactatc
cttgttaaaaaggaaatacctcgcagtacactggactcattcatgcagccattccagagc
acactgtggctactggtgggtctatcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaggaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgtcttgttgaactctggaattgga
gaaggtgccccacgtagtttttcagcgagaatcttgggaatggtgtgggctggctttgct
atgattatagtagcatcctatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctaaggaacccatcagacaagttcatc
tatgccacagtgaagcaaagttcggtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactacgaaagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagtt
gctggaggcattgcagctgggatcttcctcattttcatcgagattgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaatgtttggaggaag
aacctacagccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagac
agcgacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatc
aagagacgtaggtcctccaaagacacggtaaggaggttaaggaatggcatctctttttac
tcagccggtctctcttcctctttctgcgtctgtctttctctcgtcctattcttccgctcc
tctctctgtatctactttcttctgtcttaa
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