Sinocyclocheilus rhinocerous: 107754622
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Entry
107754622 CDS
T04916
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04020
Calcium signaling pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107754622
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107754622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107754622
Ion channels [BR:
srx04040
]
Ligand-gated channels
Glutamate (ionotropic)
107754622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
107754622
NCBI-ProteinID:
XP_016426622
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQKKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTTLDGTCKEEYTPNGVLIKKVICSGPNETIPGNTSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAD
SDPKKKPSFRSISTTLASSIKRRRSSKDTVRRLRNGISFYSAGLSSSFCVCLSLVLFFRS
SLCIYFLLS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttattctcctgctcatgcgtgcggggcggttgcgag
cccaagattgtgaacatcggagccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggtcactcaggcgaaccaggtgtacggaagggataaatttaagttgaccgccatc
tctgtcactcacaaagccaatgcgattcagatggcgctgtctgtgtgtgaggatctcatt
tccagtcaggtgtatgccatcctggtgagccatccaccacagtccaatgaccatctgacg
cccactccggtctcctacaccgcagggttctaccgcatacctgtagtagggctcaccacc
aggatgtccatttactcagacaagagcatccatctctcattcctccgcacagtgccgccc
tattcccaccaggcacatgtgtggtttgatatgatgcgggagttccgctggaatcacatc
attctaatcgtcagtgatgaccatgaaggcagagcggcacagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tatgacaacaagagaggacctaaggccgagaaagtgcttcaattcaaccaagagactaac
ttaactgccctgctcctggaggccaaagagttggaagcccgagtgatcattctctctgcc
agcgaagaagatgcagcagccgtgtacaaaacagcacgcttcctcaacatgacaggctca
ggctatgtatggctggttggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gacgggctgattggcctccagctcatcaatggcaagaatgaatcggcgcacatcagtgat
gctgttgctgtcgtagcccagtccatccaagagctctttgagaaagagaacatcacagaa
cctccaaggggctgcgtaggcaataccaacatctggaagaccgggccactctttaaaagg
gtattgatgtcttccaagtacccagagggcctaacaggacgcgttgagttcaatgacgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaacggaacacaagtggtgatgaataaacagaagaagataatttggcct
ggaggtgaaacagaaagaccaagaggattccaaatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactacgttggacgggacctgcaaggaa
gagtacacacctaatggagtcttaattaaaaaggtgatctgcagtggaccaaatgagacc
atcccaggtaacacatcaggacgcccaattgttccccagtgttgctacggattttgcatt
gaccttctgatcaaattggcaatgaccatgaacttcacctatgaagtacacctggtggca
gatgggaaatttggaacacaagaaagagtaaataacagtaacaagaaggaatggaacggc
atgatgggcgagctcctgggtggccttgctgatatgatcgttgcgcccttgacgatcaac
aatgaacgagcccagtatatagaattctccaagcctttcaaataccaaggactgactatc
cttgtgaaaaaggaaattcctcgcagtacactggactcgttcatgcagccattccagagc
acactgtggctactggtgggtctatcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaagaggatgcc
ctcaccttatcttcagctatgtggttttcctggggtgtcttgttgaactctggaattgga
gaaggtgccccacgtagtttttcagcaagaattttgggaatggtgtgggctggctttgct
atgattatagtagcatcctatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctaaggaacccatcagacaagttcatc
tatgccacagtgaagcaaagttcggtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactacgaaagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgcttgtt
gctggaggcattgcagcaggaatcttcctcatcttcattgagattgcatacaagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaag
aacctacagccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagac
agcgacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatc
aagagacgtaggtcctccaaagacacggtaaggaggttaaggaatggcatctctttttac
tcagccggtctctcttcctctttctgcgtctgtctttctctcgtcctattcttccgctcc
tctctctgtatctactttcttctgtcttaa
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