Sinocyclocheilus rhinocerous: 107757032
Help
Entry
107757032 CDS
T04916
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03440
Homologous recombination
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107757032
03460 Fanconi anemia pathway
107757032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107757032
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107757032
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107757032
FA (Fanconi anemia) pathway
Downstream FA components
107757032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
107757032
NCBI-ProteinID:
XP_016429869
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MAAAPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA
LAWQQAQFGKEQLAGTSSADCKKPEVATSCQCVCHNRNAHPTFSSTAPKPPLVDLPHEGT
SAQATTPLSKEDKSDQPRKSTLSSRLSEKLQASLSNGEQDDDFKTDRKRIRTLGTEQKKS
KQRCLERGVIYIDDDEEEEHLERPVPGAQSWTMELNSGARADSCQSQPQCCSPVSCSLCP
CANLKAGQKTVEKSKDNDKDKEGSGRKKIPKVFFGTRTHKQITQIARELKRTLYSTVPMT
ILSSRDHTCVHPEVVPHANRNERCKELLEAKSGLSCRYYHNVHKMRDQSTLQWVHGLHHA
WDIEDLVRLGGKLRSCAYYAARELMQDACIVFCPYNYLLDPLIRESMEINLKEQIVVLDE
AHNIEDCARESASYTLNQAQLLLARDEIDGMVTHNIRRDQHRPLLAFCCSLANWVQESCN
SLEEREYESSCKVWTGTEILGIFHGLGITADTFFLLQKNLAAVLEKEERIGLVNGREDTV
QVPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQSFMWTTQQDLPDAQGFFARP
QRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSDSVRSIVLTSGTLSPMGSFSSELGIKFSI
QLEANHVISKSQVWVGTVGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLC
FLPSYKMLDKLRDRWINTGLWDKLEERKTVITEPRGGGKGDFDELLQTYYEAIRGTAANS
ENRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRG
LLPGSRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLVR
HHDTFTGAMQSLESFSQCQLGAVETFEETQSQAAPQYPSPSIAISPSPEIITPHKPFDSQ
LAQPNLHTEVQAANSESRSSESGDQKNIQHPCEPSRERNVQRMPWATSQLFTSTPVSSHF
KTPIFQSEPDVNLVNNKQVQKEVIPVLPVAPKHQINGASCLNDSSVEPQLEQLFVIPTST
SKQNTSGMDHEDTEEDEQSIFYSPELFEGDEEEKEETTEVKKSPPEVSRPLANSTASVLL
EDLFGSEQGKRTLSEDLVSSAVPDNTLLQGSTEQRDLNRGTDFENVPGSQNGTSSSRLRR
LSRCRQKRPSTSATSGKLTNYFKRTPSTSQPCIITIDD
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggctccagtggagtacaccataggaggggtgaaaataaacttcccttgcaag
gcttatccatctcagctggccatgatgaactccatcattcgtggacttaacaatgggcag
cattgtctattggagagccctactggcagtgggaagagtcttgctttgctttgttcggcc
ctcgcatggcagcaagcacagtttggtaaggaacagcttgcaggcactagttcggctgac
tgcaagaaaccagaagtggctacttcatgtcagtgtgtgtgccataaccgaaatgcacac
cccactttcagcagcacagcacctaaaccacctctggttgatcttcctcatgaaggtact
tctgctcaagctacaacccctctctcaaaagaagacaaaagtgaccagcctaggaagtca
actttgtcttcccgcctctctgagaaacttcaggcctctctctccaatggagaacaagat
gatgattttaagactgacaggaagcgcattcgtacactaggcacagagcaaaagaaaagc
aagcaaagatgtctcgagcgaggagtgatttacattgatgatgatgaagaggaggagcat
ctggagagaccagtgcctggggctcagagttggaccatggaattgaacagtggtgccaga
gctgacagctgccagtcgcagccacagtgttgttctcccgtgtcttgttcactctgtcct
tgcgccaacctcaaagcaggacagaaaacggttgaaaagtccaaggacaacgataaagac
aaagagggaagcggaaggaaaaagatcccaaaagtcttcttcggcactcgtactcataaa
cagatcacacagatcgcacgggagctgaaacggacgctttactccaccgtgcccatgacg
attctgtccagccgagaccacacctgtgtccatcccgaagtggtgcctcatgccaaccgc
aacgagcgctgcaaggagctgctggaggccaagagcggtctgtcatgtcggtactaccac
aatgtgcataaaatgcgtgatcagagcactttacagtgggttcatgggctacatcatgcc
tgggacattgaggatctggtgcgtcttggaggtaagctgcggtcctgtgcttactacgca
gctcgggagctcatgcaagatgcctgcatcgtgttctgtccttacaactacctgctggac
cccctcattcgtgaaagcatggaaatcaatctgaaggagcagattgtggtgctggatgag
gctcataacatagaggactgtgcccgtgagagtgccagttacactctgaaccaagctcag
ctgttgctggcacgtgatgagattgatggaatggtgacacacaacattcggcgcgatcaa
caccggcctctgctagccttctgctgcagccttgccaactgggtacaggaaagctgcaat
agcttggaggagcgtgaatatgagtcttcctgtaaggtctggacagggacagagattctt
ggcatcttccatggccttggcatcacagcagacaccttctttttgctacagaaaaacctg
gcagcggtgctggagaaggaggagcggatcgggctagtgaacgggagagaagacacggtg
caggttcccaccatcagctccaacactcagtcaatgctcaaaagcctcttcatggtgctg
gaatttcttttcagacaaaattgcaggtttgcagatgattaccgtgtggccctccagcag
agcttcatgtggaccacccagcaggacctgcctgatgctcaaggcttttttgcacgaccc
cagcgtcgccgacagagcacccgcaccaaaactctggtgcacaccctgagcttttggtgc
ctcaaccctgccgtggcattttcagatctgagcgactcagtgcggagcatcgtgctgacc
tcaggcaccctctctcccatgggctccttttcctctgaactgggcatcaaattctccatc
cagctggaggcgaatcatgtcatcagcaagtcacaggtctgggtcggtacagttggtgca
gggcctcagggtcgtaagctttgcgccacatttcagcatgcagagacatttgccttccag
gatgaagtaggggccctgctgttgaaagtgtgccacacagtgagtcgaggggttctctgc
ttcttgccatcctacaagatgttagataaactgagggaccgctggataaacacaggtctg
tgggacaagcttgaggagcggaaaactgtgatcactgagccacgtggtggtggcaagggt
gattttgatgagttgctgcagacatactacgaggctatcagaggaacagcagccaacagt
gaaaacagagatggagcattgctggttgctgtttgcagagggaaggttagcgagggctta
gacttcactgatgataatgccagagcagtggtcactattggtatcccattccccaatatc
aaagatttgcaggtcgaactgaagatgaaatacaatgacaagcatgccaagtcgcgaggg
cttctgcctggtagccgctggtacgagattcaagcatatcgggcactaaaccaggcactc
ggaaggtgtatacgacatcgaaatgactggggggcacttatactggtagatgaccggttt
aggacaaacccgaacaaatatatcacaggcctgtcaaagtgggtgcgtcagctagtgagg
caccatgacaccttcactggcgccatgcagtccctggagtccttttctcaatgccagctg
ggggcagtagagaccttcgaagagacacaatctcaggctgcccctcaataccccagcccc
tccattgctatctcaccctctcctgagataatcaccccccacaagccatttgactctcag
cttgcgcagccaaacctacacaccgaggtgcaggcggccaactctgagagcaggtcttct
gaatcaggtgaccaaaagaatatacagcatccatgtgaaccaagcagagaacgtaatgtc
caaagaatgccatgggctacaagccaactcttcacctccactccagtcagtagccatttc
aagactcctatttttcaatctgagccggatgtgaatttggtgaacaacaagcaagttcag
aaggaagttattcctgtgcttcctgtggcaccaaagcaccaaataaatggtgcttcttgc
ctaaatgacagttcagttgaacctcaacttgagcagctctttgtgatccctacctctact
tcaaagcagaacaccagcggaatggaccatgaagatactgaagaggatgaacaaagtatc
ttctacagccctgagctgtttgaaggagatgaggaggagaaggaagagactactgaggtg
aagaaatcgcctccagaagtcagccgtcctctcgctaatagtacagccagtgttcttttg
gaggatttgtttggttcagagcagggcaagaggacattgtctgaagaccttgtgagcagc
gctgtcccagacaacacattgttacagggtagtacagagcagagagatttaaaccgtggt
acagattttgaaaatgtgcctggctcacaaaatggcaccagcagtagtcggttacgtagg
ctctccagatgtagacagaaaaggcccagcacatcagcaacatcaggtaaactcaccaac
tattttaaacgcacaccctcaaccagccaaccgtgcatcattacaattgatgactga
DBGET
integrated database retrieval system
