Sinocyclocheilus rhinocerous: 107757455
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Entry
107757455 CDS
T04916
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107757455 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
srx04090
]
107757455 (vcam1)
04091 Lectins [BR:
srx04091
]
107757455 (vcam1)
CD molecules [BR:
srx04090
]
Proteins
107757455 (vcam1)
Lectins [BR:
srx04091
]
I-type lectins (Siglecs)
107757455 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM_N
C2-set_2
Izumo-Ig
ICAM1_3_5_D2
C1-set
Motif
Other DBs
NCBI-GeneID:
107757455
NCBI-ProteinID:
XP_016430416
UniProt:
A0A673NLL8
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MNSALLLTLLLPVAVVSHVLDLPSEVLFKVGDRRELTCSVSSCPEKVKFVWTSLEDRPIF
AAIDSQDRESVLVFDNVMKNHENTIVCKATCEKETKQATTKIKVYSFPRNPVISGYDSLK
LGEENVLGCEVSSIHPSEFLKVQWLYEDKVLQTDEGEPERDAFSVHYIFTPSSEDDGKAI
TCRASLDVYGIPPDEMTKETSAHMTVLSAPHNVKVSGVTVVPLGSSLTLTCEAEGKPKPA
FTWTALIPGGQSVEMGKHHDLLVHNVSLSDAGTYQCDVRNDFGSQRASVSVVVQAPPMDT
LIVASPQSILKEGDSVSFSCKSSGVPVTHVVLSRRVNGVKTELMSSEGAETSVALLSVKL
GDSGMFVCEAFNEYGRQETTLNLTVEAHLLEVALQPDGEVMSERGSSLVLSCQASGCPQP
EFSWKNLSNMPILRRLKTDGFQSQLFFDLVELEDEGTYLCEVTCGSIKKSKLTEVKVFSF
PSPVVKNSGPSLVGEIMKLTCTVQEVFPANLFQILWMDGEREMHSETGSFSSGTTNLTSV
YSYYVDTEDQDKHITCKVLLEMHGVPAAQSVKTASTTLSIHYPPRVTRITVSPLTELKEG
ESVSISCLSDSFPVGRTVLSRVEDGIQTELMANDGLETLFTILSVELDDSGIYICETSNM
YGSHNDSVEITIKAPPRNMTVEIFPSTDVQEGQNITICCRSVSFPPPAVVLSKLDSEKNV
YSLDGVFLLINLTPNDTGLYQVNVTNYLGYETEIFNINVMEKIVNPPLGWNDFFLVD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctttactgttgactttgcttctaccagttgcagttgtttcccatgtactg
gacctgccgtctgaagttctgttcaaagtgggcgacaggagagagttgacttgcagcgta
tcatcttgcccagagaaggtgaagtttgtttggacctcattagaagacagaccgatattc
gctgctattgattcacaggacagagaatctgtgctggtctttgacaacgtgatgaagaat
cacgaaaacaccatagtgtgcaaagcaacctgtgaaaaggagacaaaacaggcgacaaca
aagattaaagtttattcttttccaagaaacccagttatatccggatatgatagcttgaaa
ctgggcgaggaaaatgtcttgggctgtgaagtgtcttctatacacccttcagagttcctt
aaagtgcagtggctctatgaagacaaagttcttcagactgatgagggagaacctgagaga
gatgcattttcagttcattacatattcacgccttcaagtgaggatgatgggaaggcgata
acatgcagagcatcactcgatgtgtatggtataccacctgatgagatgaccaaggagacg
tctgcacacatgacagttctctctgcaccgcataacgttaaagtatctggagtgactgtt
gtcccactgggatccagtttaactttgacctgtgaggccgagggcaagccaaagcctgcg
tttacatggacggctcttataccaggtggccagtctgtggaaatgggaaaacatcatgat
ctcctcgtacataacgtgtccttatcagatgctggtacttaccagtgtgatgttagaaat
gactttggaagccaaagggccagcgtttcagtagtcgttcaagcacctcctatggatact
ctcattgtagcaagtccacaatccattctgaaggaaggagactctgtgagcttttcctgc
aagtccagcggagttccagtgacacacgtggtgctcagcaggagggtgaatggtgtaaaa
acagagctaatgtctagtgaaggggctgaaacatcagttgccctcctctccgtcaagctg
ggtgactctggcatgtttgtgtgtgaggctttcaatgagtatggcaggcaggagaccact
ctcaatctaactgttgaagctcatttgctagaagtggcgctacaaccggacggtgaggtc
atgtcggagagaggctccagcctggtcctctcctgtcaggcttcaggttgccctcaaccc
gagttctcctggaagaatctttcaaatatgccgatcctcaggcggcttaagacagatggc
ttccagtcccagctgtttttcgatctagtagagttggaagacgagggaacttacctttgt
gaggtcacatgtggctcaatcaagaagtccaaactaacagaagtgaaggtgttttcattt
ccaagtcctgtcgtaaaaaactctggaccttctctggtgggagagataatgaaattgacc
tgcactgttcaggaagttttcccggccaaccttttccaaatcctgtggatggatggagag
agagaaatgcattcggaaactggatcattttcaagtggtacaacaaatctgacttcagtg
tattcttactacgtagacactgaagaccaagacaaacacatcacctgcaaagttttgctg
gaaatgcatggtgtgccagctgctcaatcagtaaagacagcatctactacattgtccatt
cactatcccccgagagtgaccaggattactgtgagcccactgacagagttaaaggaagga
gaatccgtaagcatttcttgcctttccgacagctttccagtggggcgtacagtgctgagc
agggtggaggacggcatacaaacagagctaatggccaatgatgggcttgaaacattgttt
accatcctttcagtcgagttggatgactctggcatctatatttgtgaaacttctaacatg
tatggaagccacaatgatagtgtggagattaccattaaagcaccacccaggaatatgaca
gtggagatctttccatccacggatgttcaggaggggcagaatatcaccatctgttgtcgc
tccgtgagcttccctccacctgcggtggtcctcagtaagctggatagtgagaaaaatgtc
tactctcttgatggtgtattcctactgatcaacctcacacccaacgacacaggcctatac
caggtcaacgtcaccaactatctgggctacgagacagagatttttaacatcaatgtgatg
gagaaaatagtcaaccctccattaggctggaatgatttttttttggtggattga
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