Sinocyclocheilus rhinocerous: 107757976
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Entry
107757976 CDS
T04916
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04020
Calcium signaling pathway
srx04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107757976
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107757976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107757976
Ion channels [BR:
srx04040
]
Ligand-gated channels
Glutamate (ionotropic)
107757976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
DUF3663
NYN
Motif
Other DBs
NCBI-GeneID:
107757976
NCBI-ProteinID:
XP_016431074
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNMYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEHTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTVV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaatatcggggctgtcctgagccagaagagatatgaacaagtgttcaaa
gacgctgtcacccaagccaacaacatgtacggcaaagataagttcaagatgaacgctatt
tcagtcacccataagccaaacgctatccagatggcactctccgtatgtgaggatctcatc
tctaaccaggtgtatgcgatcttggtgagccacccaccccagtccaacgaccatctgact
cccactccagtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactctgataagagcatccacctctccttcctgcgcacggtgccaccc
tattcccaccaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacatc
atcctgattgtgagtgatgaccacgagggcagagcagcacaaaaaagactagaaaccctg
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaagagctagaggcccgagttatcatcctttctgca
agtgaagatgaagccgcagccatttacaaagcggcacgccagctcaatatgacaggttct
ggttatgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtacaa
gtgggcgtctacaatggctcgcaagttgtaatgaacactcagaggaagattatttggcca
ggaggagagactgaaaagccaaaagggtatcaaatgtcaacaagattgaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccaacactacgagatggaacatgtaaggaa
gagcacactgtaaatggagtcctgatcaaaaaagtgatctgcactggccctaatgagacc
attccaggtcgccccatagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aaacttgcaatgacaatgaacttcacctatgaagtgcatctagtggctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgattgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcgaaaccgttcaagtaccaggggctcacaatacttgtcaaaaag
gaaataccacgcagtacgctggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagtgaagaggaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctctgtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgctgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggcgagctgtttttccgctctggattcggtatcgggatgcgtaaa
gacagcccatggaagcaaaatgtctcactagccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaggagtgtgactccagaagcaatgca
ccagccacgctcactttcgagaatatggcaggcgtgtttatgttggtggctggtggtatc
gttgccgggatcttcctcatcttcattgagattgcatataaacgacacaaggatgcgcgc
aggaagcagatgcagctggcttttgcagcagttaacgtctggaggaagaacttacagcca
tatcctacggacattaccggccagctcaacctgtcagacccctctgtgagcacagtggtg
tga
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