KEGG   Serratia plymuthica S13: M621_15005
Entry
M621_15005        CDS       T02716                                 
Symbol
putA
Name
(GenBank) bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
sry  Serratia plymuthica S13
Pathway
sry00250  Alanine, aspartate and glutamate metabolism
sry00330  Arginine and proline metabolism
sry01100  Metabolic pathways
sry01110  Biosynthesis of secondary metabolites
Module
sry_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:sry00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    M621_15005 (putA)
   00330 Arginine and proline metabolism
    M621_15005 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sry03000]
    M621_15005 (putA)
Enzymes [BR:sry01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     M621_15005 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     M621_15005 (putA)
Transcription factors [BR:sry03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    M621_15005 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AGP44955
UniProt: S4YKN1
LinkDB
Position
3148829..3152800
AA seq 1323 aa
MGTTTMGVKLDEATRDRIKDAAQRIDRTPHWLIKQAIFNYLERLEGGSDIPEIPALAAAA
QAEADDIMPQALEESHQPFLEFAEQILPQSVNRAAITAAYRRPETEAVPMLLEQARLPAD
LAKATHKMAYDIAEKLRNQKSANGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKP
TRDALIRDKISNGNWHSHLGRSPSLFVNAATWGLLFTGKLVSTHNEANLSLSLNRIIGKS
GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTETDAQA
YLVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLQ
ARQYDIGINIDAEEADRLEISLDLLEKLCFEPQLAGWNGIGFVIQAYQKRCPFAIDAVID
MAQRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACARKLLAVPNL
IYPQFATHNAHTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRI
YAPVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVTAVEALAASEGQIG
LPHPRIPLPRELYGDKRTNSSGLDLSNEQRLASLSSALLTSATQPWRAEPIIDAELDQGV
EQPVINPAEPGDVVGYVREATEAEVSRALDAAAAAGPIWFATPPSERAAILERAAELMEG
QLQSLLGILVREAGKTFNNAIAEVREAVDFLHYYAGQVRDDFANDSHRPLGPVVCISPWN
FPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGIPQGVLQLLPGQGESVG
SVLVNDARVRGVMFTGSTDVAGILQRSIAGRLDPQGRPTPLIAETGGLNAMIVDSSALTE
QVVTDVVASAFDSAGQRCSALRILCIQEDVAEHTLQMLRGAMAECRMGNPERLSTDIGPV
IDAEAKTGIERHIQAMRAKGRKVYQAAKGNAQDEKEWSRGTFIKPTLIELDSFDELQKEI
FGPVLHVVRFQRTNLESLVDQINAAGYGLTLGIHTRIDETIARVTERAKVGNLYVNRNMV
GAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPDDAVQRTLNRQDDERPLEATARPLL
LNAHQALEQWAIAEKQSDLVQLAQRYAELGQGGTVRPLPGPTGERNTYALLPRERVLCLA
DNEADALTQLAAVLAVGSSVLWPEAELQRTLYRRLPTAVQAQISFSKDWQQDKVEFDAAI
YHGDADQLRTLCEQIAQRSGAIVSVQGFAHGETNILLERLLIERSLSVNTAAAGGNASLM
TIG
NT seq 3972 nt   +upstreamnt  +downstreamnt
atgggcactaccacaatgggcgtgaagctcgacgaggcaacacgcgaccggattaaagac
gcggcacagcgtatcgatcgcacgccgcactggctcatcaagcaggccattttcaattac
ctcgagcgtctcgagggcggttccgatattcctgaaattccagcacttgccgctgcggcc
caggccgaagcggacgacattatgccgcaagcgctggaagagtcccaccagccattcctt
gaatttgcagaacaaattttaccgcagtcggtcaatcgtgccgccattaccgccgcttat
cgccgcccggagactgaagcggtgccgatgttgctcgaacaggcgcgattacctgccgat
cttgccaaagctacccacaagatggcttacgacatcgccgagaagctgcgtaaccaaaag
agtgcaaacggccgcgccggcatggtgcaaggtctgctgcaggagttctcgctctcctcg
caagaaggcgtggcgctgatgtgcctggcggaagccctgctgcgcattccggacaagcca
actcgcgatgcgctgatccgtgacaaaatcagcaacggcaattggcattcccacctcggc
cgcagcccgtcgctgttcgttaacgccgccacctggggcctgctgttcaccggcaagctg
gtatcgacccataacgaagccaatctgtccctttcgctgaaccgcatcatcggcaaaagc
ggcgaaccgctgatccgcaaaggcgtggatatggcgatgcgcctgatgggcgagcagttc
gtgaccggcgaaaccatcgccgaagcgctggccaacgcacgcaaactcgaagacaaaggc
ttccgctattcctacgacatgttgggtgaagccgcgctgaccgaaaccgacgcgcaggcc
tacctggtatcctaccagcaggctatccacgctatcggcaaagcctctaacggccgcggt
atctatgaaggcccgggcatttcgatcaaactctccgccctgcacccgcgttacagccgc
gcgcagtacgagcgcgtaatggaagagctttacccgcgcctgctgtcgctgaccctgcaa
gcccggcagtatgacatcggcattaacatcgacgccgaagaagctgaccgtctggagatc
tcgctcgatctgctggagaagctgtgctttgaaccgcaactggccggttggaatggcatt
ggcttcgtgatccaggcatatcaaaaacgctgcccgttcgccatcgacgcggttatcgac
atggcgcaacgcagccgccgccgcctgatgatccgcctggtgaaaggcgcctattgggac
agcgagatcaaacgcgcccaaatggacgggctggaaggctatccggtatacacccgcaag
gtctacaccgacgtgtcttacctggcctgcgcccgcaaactgctggcggtgccaaacctg
atttacccgcagttcgccacccataacgcccacacattgagcgcgatttatcatctggcg
ggcaacaactattatccgggtcagtatgagttccaatgcctgcacggcatgggcgaaccg
ctgtatgagcaagtagtgggcaaagtggccgacggcaaactgaaccgcccttgccgcatc
tatgcgccggtcggcacccatgaaacgctgctggcgtatctggtgcgccgcctgctggaa
aacggcgccaacacctcgttcgttaaccgtattgccgacgccaccctgccgctcgacgaa
ctggtcgccgatccggtcaccgcagtcgaggccctggccgcaagcgaaggtcagattggc
ctgccgcacccgcgcattccgctgccgcgtgagctgtatggcgataagcgcaccaactcc
agcggcctggatctgtccaacgaacagcgtctggcctcgctgtccagcgcactgttgacc
agcgccacccagccatggcgtgcagaacctattatcgacgccgagctggatcagggcgtg
gaacagccggtgattaacccggccgagccgggcgatgtggtcggttacgtgcgtgaagcc
accgaagcggaagtcagccgggcgctcgacgccgccgccgccgccggcccaatctggttc
gctaccccgccttccgaacgcgccgccattcttgagcgcgccgcagaactgatggaaggc
cagttgcaaagcctgctgggcatcctggtgcgcgaagcgggtaaaacctttaacaacgcc
atcgccgaagtgcgtgaagcggtcgatttcctgcattactacgccggccaggtgcgcgac
gacttcgccaacgacagccatcgcccgctgggcccggtggtctgtatcagcccgtggaac
ttcccgctggcgatcttcaccggccagattgccgcggcattggcggcaggcaacagcgtg
ctggccaaaccggccgagcaaactccgctgattgccgcacaggcggtgcgcattctgctg
gaagccggtattccccaaggcgtgctgcaactgctgccgggccagggtgagagcgtcggt
tcggtgctggtcaacgacgcccgcgtgcgcggcgtgatgtttaccggatccaccgacgtg
gcaggcatcctgcaacgcagcatcgccggtcgcctggatccgcagggccgcccaacgcca
ttgatcgccgaaaccggtggcctgaacgccatgatcgtcgactcttccgctctgaccgaa
caggtggtgacggacgtggtcgcctcggccttcgacagcgccggtcagcgctgttccgcg
ctgcgtatcctgtgcattcaggaagacgtggcggaacatacgctgcaaatgctgcgcggc
gcgatggccgaatgccgcatgggtaacccggaacgcctgtctaccgacatcggcccggtg
atcgacgccgaagccaaaaccggcatcgaacgtcatatccaggcgatgcgcgccaagggc
cgcaaggtctatcaggcggcgaaaggcaatgcgcaggatgaaaaagagtggtcccgcggc
acctttatcaagccgacgctgatcgaactggacagcttcgacgagttgcaaaaagagatc
ttcggcccggtgctgcatgtggtccgcttccagcgtaccaatctggagtcgctggtcgat
cagatcaacgccgccggctatggcctgacgctgggcattcacacccgcatcgatgaaacc
atcgcccgcgtcaccgaacgcgccaaagtgggcaacctgtacgttaaccgcaacatggtt
ggcgcggtcgtcggcgtgcaacccttcggtggcgaaggcttgtccggcaccggcccgaaa
gccggtggcccgctgtatctctaccgcctgctggccaaccggccggacgacgccgttcaa
cgcaccctgaaccgccaggacgacgaacgcccgctggaagccaccgcgcggccgctgctg
ctcaatgcccaccaggcgctcgagcagtgggcgattgccgaaaaacaaagcgatctggtg
cagttggcgcaacgttacgccgagctgggccagggcggcaccgttcgaccgctgccgggc
ccgaccggcgaacgcaacacctacgccctgctgccgcgtgagcgcgtgctgtgcctggcg
gacaacgaggccgatgcgctgacccaactggctgcagtgctggcggttggcagcagcgta
ctgtggccggaagccgaattgcagcgcacgctataccgccgcctgccgacggctgttcag
gcacaaatcagcttcagcaaggactggcagcaagataaggtggaattcgacgccgccatt
taccacggcgacgccgatcagctgcgcaccctgtgtgaacagatcgcccaacgcagcggc
gcgatcgtctcggtacagggctttgcccacggtgaaaccaacatcctgctggaacgcctg
ctgatcgaacgctcgctcagcgtcaacaccgccgccgccggcggtaacgccagcctgatg
accatcggttaa

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