Serratia plymuthica S13: M621_20085
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Entry
M621_20085 CDS
T02716
Name
(GenBank) lysine decarboxylase CadA
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00310
Lysine degradation
sry01100
Metabolic pathways
sry01110
Biosynthesis of secondary metabolites
sry01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
M621_20085
Enzymes [BR:
sry01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
M621_20085
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AGP45748
UniProt:
S4YRS7
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All DBs
Position
complement(4225905..4228061)
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AA seq
718 aa
AA seq
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MNIIAIMSPTGVYYKDEPIRELHTALATMGFQLVYPKNGGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINQYSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQHEFTHESIAGRVAATANASWPVH
AVITNSTYDGLLYNTDYIKQTLDVPSIHFDSAWVPYTNFHPIYEGKSGMSGERTPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPNYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD
SDHMYLDPIKVTILTPGMNELGTLEESGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAAGIHRLICRH
DLPRLMLRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPPADINV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgcaatcatgagcccaacgggcgtctattacaaagatgagcctattcgt
gagctgcacaccgcattggctacgatgggtttccagttggtttacccgaaaaatggcggt
gatctgctgaagctgatcgaggccaatgcgcgtatttgcggagtgattttcgattgggac
gactacagcctggagctgtgcagcgaaattaacgagctgaatgaatatctgccgctatat
gcgtttatcaaccagtattccaccttcgacgtcagtttgcatgaaatgcgcatggtgctg
tatttctttgagtatggcttgaatgcggcagatgatattgcgcagcgtatccagcaatac
accgcagaatatatcgacaccattacgccgcccttaaccaaggcactattcaactatgtg
cgcgagggcaaatacactttttgcaccccagggcacatggccggcactgccttccagaaa
agcccggttggctgcctgttttacgattttttcggtgccaacaccttaaaagccgacgtc
tccatatcggtgaccgagctgggttcgttgctggaccataccggcccgcatctggaggcc
gaagagtatattgcgcgtacctttaacgccgagcagagctatctggtgaccaatggcacc
tccaccgccaacaagattgtcggcatgtattcggccccggcaggcagcacggtgttgatt
gaccgcaactgccataaatcgctgtgccatctgctgatgatgagcgatatcgtcccgatc
tacctgcgcccgctgcgtaatgcctacggcattcttggcggtattccgcagcatgagttt
acccatgagagcattgccggccgggtcgccgccactgcgaatgccagttggccggtacat
gcggtgatcaccaactcgacttatgacggcctgctgtataacaccgattacatcaagcag
acgctggatgtgccatcaatccattttgactccgcctgggtaccctataccaacttccat
ccaatctacgaaggcaagagtggtatgagcggtgaacgcacgcccggcaaggtgatctat
gaaacgcagtctacgcacaagctgctggcggcattctcgcaggcctcaatgattcacatt
aaaggcgattacgacgaaagcacctttaacgaagcctatatgatgcataccaccacttcg
ccgaactacggcattgtggcgtcgatggagactgccgccgcaatgctgcgcggcaaccct
gggcggcggttgattaaccgctcggtagagcgtgcgctgcatttccgtcgtgaggtgcag
cggttgcgggaggagagcgatagctggttcttcgatatctggcagcctgaagagatcgac
gaggcgcaatgctggccgttgaacccggacgataattggcatgggtttggcaataccgac
agcgatcacatgtacctcgatccgatcaaggtgacgatcctgacgccgggaatgaacgag
ctgggtacgctggaggagagcgggatcccggcggcgctggtggcgaaatacctggacgag
cgcggcatcgtggtggaaaaaaccgggccttataatctgctgttcctgttcagcatcggc
attgataaaaccaaggcgatgagcttactgcgtggcctgaccgattttaaacgcgcttac
gatcttaatctacgggtgaagaacatgctgccggatctgtatgcggaggatcctgatttc
tatcgcaatatgcgcattcaggatctggcggccgggatccaccgattgatctgccggcac
gatctgccgcggctgatgctgcgggcgttcgatgtgttgccggaaatgaagctgacgccg
caccaaatgttccagcagcaggtacgtggcaatgtggaaacctgcgaactggatcaactg
gtgggcaaggtggcggccaatatgatcctgccttatccaccaggcgtgccgttagtgatg
ccgggtgagatgatcactgaagagagccgtgcggtgctcgatttcttgctgatgctgtgc
tccatcggcgagcgttatcccggctttgaaaccgatatccacggtgcgaaattgaccgag
gacggacgttatctggtgaaggtactgaaaacgccgccggccgatatcaacgtttga
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