Serratia rubidaea: AXX16_2038
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Entry
AXX16_2038 CDS
T04417
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
srz
Serratia rubidaea
Pathway
srz00260
Glycine, serine and threonine metabolism
srz01100
Metabolic pathways
Module
srz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AXX16_2038
Enzymes [BR:
srz01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AXX16_2038
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AXX16_2038
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
HI0933_like
FAD_binding_2
NAD_binding_8
GIDA
Pyr_redox_3
FAD_binding_3
DAO
AlaDh_PNT_C
Thi4
Pyr_redox
Lycopene_cycl
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
AML57745
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All DBs
Position
complement(2209790..2212816)
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AA seq
1008 aa
AA seq
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MKQVNRLADGGRIDRSRPLNFRFNGQTLQGFAGDTLASALLANGVDIVNRSFKYGRPRGI
VAAGAEEPNAVVQLGSTEASQVPNVRATQQALYEGLTASSTNGWPSTERDLMGAVGKMLG
RFMPPGFYYKTFMKPASMWMTWEKYIRKGAGLGRSPMARDPDRYDHLNQHCDVLIIGAGP
AGLAAALAAGRSGARVMLADEQEEMGGSLLDSREPLNGRDAVAWVADTLRELATLDNVQL
LPRTTATGRHDHNFVTLLERRTDHLGETAPDHRARLRLHRVRAKRIVLASGAHERPLVYA
GNDIPGNFVAGALSTYIHRYGVTPGQRLVLSTSNDQAYCAALDWLDSGREVVAIVDARDN
PDGELVAQARARGIRILCGSAVIEAQGGSRVSRVRVARIDPAGFRVVDRVETLNCDTVAS
SGGYSPVIHLAVHTGARPIWRDEVSGFVAPQVEGMIAAGAVTGAFTTEQALRDGAAAGRQ
AAEQSGGKPQDVTLPEVAKRRDGAALALYQVPHDLPTSRAPKQFVDLQNDVTAAAIELAI
REGFESIEHIKRYTVMGFGTDQGKLGNINGMAIAARCLRRAIPEVGTTVFRPNYTPVAFG
AVAGRHCAELFEPERHTAMHQWHLDRGAEFEEVGQWKRPWYFSQRVDGRSETLEEAVARE
CRAVRNGVGILDASTLGKIDIQGPDARTFLERIYTNKWAKLGFGRVRYGLMCKDDGMVMD
DGTTSCLGANHFLMTTSTGGAAAVLEWLELWHQTEWPDLQVYFTSVTDHWATLSLSGPES
RRLLQEVCDIDLSRDTFKFMDWRSGTVAGVPARVFRISFTGELAYEVNVQANYARHVWEA
LFEHGEKYGLTPYGTETMHVLRAEKGFIIAGQDTDGSMTPEDLGMQWCVGYDKSFSWVGK
RALTRADTRRTDRKQLVGLRPKNPRVVLEEGAQIVLDPHHPIPMPMVGHVTSSYYSPTLD
SGFALAVVKDGHQKMGDTVWLPMVDGQIHEAEIVSPIFVDPKGERQNV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggtgaatcgtctggccgacggcggtcgcatcgaccgcagccgtccgctgaat
tttcgttttaacggccagaccctgcaggggtttgccggcgataccctggcctcggcgctg
ctggccaacggcgtggatatcgtcaaccgcagctttaaatacggccgcccgcgcggcatt
gtcgccgccggcgccgaagagccgaatgccgtggtgcagctgggcagcacggaagccagc
caggtgccgaacgtgcgcgccacccagcaggcgctgtatgaagggctgacggcgagcagc
accaacggctggcccagcaccgaacgcgatctgatgggcgccgtgggtaaaatgctcggg
cgctttatgcctcccggcttttactacaaaacctttatgaaaccggcctcgatgtggatg
acctgggagaaatatatccgcaagggcgccgggctggggcgcagcccgatggcgcgcgat
ccggatcgctacgatcatcttaaccagcactgcgacgtgctgattatcggcgccggcccg
gccggtctggccgcggcgctggccgccggacgcagcggcgcgcgggtgatgctggcggat
gaacaggaagagatgggcggctcgctgctcgacagccgcgaaccgttaaacggccgcgac
gccgtcgcctgggtggcggacaccctgcgcgagctggcgacgctggacaacgtacagctg
ctgccgcgcaccaccgccaccggccgtcacgaccacaactttgtcaccctgctggagcgg
cgcaccgaccacctgggcgaaacggcgccggaccatcgcgcgcgtctgcgtctgcaccgg
gtgcgggccaaacgcatcgtgctggccagcggcgcccacgagcggccgctggtctacgcc
ggcaacgatattcccggcaacttcgtcgccggcgccctctccacctatattcaccgctac
ggcgtcacgccgggccagcgtctggtgctgtcgaccagcaacgaccaggcctactgcgcc
gcgctggactggctggacagcggccgggaagtcgtggcgatcgtcgacgccagggataac
ccggacggcgaactggtggcccaggcgcgcgcccgcggcatccgcatactctgcggcagc
gcggtgatcgaggctcagggcggttcccgagtcagccgcgtgcgggttgcccgcatcgac
ccggccggtttccgggtggtggatcgggtggaaaccctgaactgcgacaccgtcgccagc
tcgggcggctacagcccggtgattcacctggcggtgcataccggcgcgcggccgatctgg
cgcgatgaagtgtcgggctttgtcgcgccgcaggtggagggcatgatcgccgccggcgcg
gtaaccggcgcgtttaccaccgaacaggcgctgcgcgacggcgcggcggcaggccgccag
gccgccgaacaaagcggcggcaaaccgcaggacgttacgctgccggaggtggcgaaacgc
cgcgacggcgcggcgctggcgctgtatcaggtgccgcacgatctgcccacctcccgggcg
ccgaagcagtttgtcgatctgcagaacgacgtcaccgccgccgccattgaactggcgata
cgcgagggctttgagtccatcgaacatatcaagcgctacaccgtgatgggcttcggcacc
gatcagggcaagctgggcaatatcaacggcatggccatcgccgcccgctgtctgcggcgc
gccatccccgaggtcggcaccaccgtgttccgccccaactacacgcccgtcgcctttggc
gccgtggccggccgccactgcgccgaactgttcgaaccggaacgtcacaccgcgatgcat
cagtggcatctggatcggggcgcggagtttgaagaggtcggccagtggaaacgcccgtgg
tatttctcgcagcgcgtcgacggacgcagtgaaaccctggaagaggccgtggccagagag
tgccgcgccgtgcgcaacggcgtggggatcctcgatgcgtcgaccctcggcaagatcgat
attcaggggccggacgcccgcaccttcctggagcgtatctacaccaacaagtgggcgaag
ctgggcttcggccgggtgcgctacggcctgatgtgcaaggacgacggcatggtgatggat
gacggcaccaccagctgcctcggggcgaaccacttcctgatgaccaccagcaccggcggt
gcggcggcggtgctggagtggctggaactgtggcatcagaccgaatggccggatctgcag
gtgtatttcacgtcggtgaccgaccactgggccaccctctccctgtccgggccggagtcc
cgccgcctgctgcaggaggtgtgcgatatcgacctgtcgcgcgacacctttaagtttatg
gactggcgctccggcacggtggccggcgttccggcgcgggtgttccgcatctcgtttacc
ggcgagctcgcctatgaggtgaatgtgcaggccaactacgcgcgccacgtctgggaagcg
ctgttcgagcacggtgaaaagtatggcctgacgccttacggcaccgaaacgatgcacgtt
ctgcgcgccgagaagggctttattatcgccggccaggataccgacggctccatgacgccg
gaagatctcggcatgcagtggtgcgtgggctacgacaaaagcttctcctgggtaggcaag
cgagcgctgacgcgcgccgacacccggcgcaccgaccgcaaacagctggtcggcctgcgg
ccgaaaaacccgcgggtggtgctggaagaaggcgcgcagattgtgctggatccccaccat
cctatcccgatgccgatggtcggccacgtcacctccagctactacagccctaccctggac
agcggcttcgcgctggcggtggtgaaagacgggcaccagaaaatgggcgataccgtctgg
ttgccgatggtcgacggccagatccatgaggccgaaattgtcagcccgatctttgtcgat
cccaaaggagagcgccaaaatgtctga
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