Serratia rubidaea: AXX16_3359
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Entry
AXX16_3359 CDS
T04417
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
srz
Serratia rubidaea
Pathway
srz00860
Porphyrin metabolism
srz01100
Metabolic pathways
srz01110
Biosynthesis of secondary metabolites
srz01120
Microbial metabolism in diverse environments
srz01240
Biosynthesis of cofactors
Module
srz_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
srz_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AXX16_3359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srz04147
]
AXX16_3359
Enzymes [BR:
srz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
AXX16_3359
Exosome [BR:
srz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AXX16_3359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AML59054
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All DBs
Position
3614482..3615450
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AA seq
322 aa
AA seq
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MNSLPTRLRRLRSSEARRSLFQEDELRLSDLVLPIFVEEDTSEYLELNALPGIKRIPESR
LAFELEKYAKSGIRSIMTFGVSHHKDDTGSDTWNENGLVSRMARICKDTVPEMILMSDTC
FCEYTTHGHCGVVHDHSVDNDATLLNLQKQAVAAAHAGADFIAPSAAADGQVQAIRQALD
AAGFGNTGIISYSTKFASSLYGPFREAGGSELKGDRKTYQMNPMNRREALRESLIDEAEG
ADALMVKPASYYLDVIRDIRNASTLPVAAYQVSGEYAMIKFAAAAGAIDEAQVVRESLSS
IKRAGADFIFSYFAADLAQQGL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaattccctgccaacccgcctgcgccgcctgagaagttccgaggcgcgccgttccctg
ttccaggaagatgaactgcgactgtccgacctggtgttgcccatcttcgtcgaggaagat
acctcggaatatctggagctgaacgcgctgccgggcatcaaacgcatccctgaatccaga
ctggcttttgagctggagaaatacgcgaaaagcggtatccgcagcatcatgacgtttggg
gtgtctcaccataaagatgacaccggcagcgatacctggaacgaaaatggcctggtgtca
cgtatggcgcgtatctgtaaagataccgtcccggaaatgatcctgatgtcagacacctgt
ttttgtgaatacaccacccacggccactgcggcgtggtgcacgatcacagcgtcgacaat
gatgccacgctgctgaacctgcagaagcaggcggtggccgcggcgcacgccggcgccgac
tttatcgccccgtctgccgcagccgacggccaggtgcaggccatccgtcaggcgctggac
gcagccggcttcggcaataccggcattatctcctactccaccaagttcgcctcctccctg
tacgggccgttccgcgaggccggcggcagcgaactgaagggcgaccgtaaaacctaccag
atgaaccctatgaaccgccgggaagcgctgcgcgagtcgctgattgacgaagccgaaggt
gctgatgcgctgatggtcaaaccggccagctattatctggacgttatccgtgatattcgc
aacgccagcacgctgccggttgcggcctatcaggtcagtggggagtacgcgatgattaaa
ttcgccgccgccgcgggcgcgatcgatgaagcccaggtggtgcgtgagtcgctgtcgtcc
attaaacgtgccggcgccgactttatcttctcttacttcgccgccgatttggcgcagcag
ggcctgtaa
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