Swingsia samuiensis: E3D00_08610
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Entry
E3D00_08610 CDS
T06080
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00190
Oxidative phosphorylation
ssam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
E3D00_08610
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3D00_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssam03019
]
E3D00_08610
Enzymes [BR:
ssam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
E3D00_08610
Messenger RNA biogenesis [BR:
ssam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E3D00_08610
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QDH18068
UniProt:
A0A4Y6UN22
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All DBs
Position
1815179..1817374
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AA seq
731 aa
AA seq
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MVVPTRQDYEDIVRSPYRFINRELSWLDFNQRVIEEAENARNPLLERIRFLSISASNLDE
FFSVRVAGLVGQVREGMIVRSPDGATPVQQLSAVRKKAHFLIEEQQRVWKLLEVELKEKN
ISIVNSLDALDERDRQELSAIFDERVFPVLTPLAVDLSHPLPFIPNMGLALVMRLKDPVT
LNHVMDGLVLLPTQVSRFLRLPDRLDENGRALGEIRFILLEDLIRLFADRLFPGLMIGAA
GVLRVIRDTDVEFEDEAEDLVRSYETALKQRRRGVCIYLALDQNLPETLGREMGEELGVG
EEDIVTVPHLVGISDLKQLIVDDRPDLVFPSYTPRFPERILDYDGDCFAAIRSKDILVHH
PFESFDVVVQFLRQAALDPNVLAIKQTLYRTSRDSPIVHALIEAAESGKSVTAMVELRAR
FDEEANIRLARTLEAAGVQVVFGFAHLKTHAKMSLVVRREGSTLKTYAHFGTGNYHPITA
RIYTDLSFFTCDPQLSADSARLFNYMTGYATPAKMEALAFSPVTIRSTLEQLIRDEISFA
KEGKPAKIWLKMNSLVDAELIDLLYEASQAGVKVVGIVRGICCLRPGVAGLSENIEIKSI
VGRFLEHSRIFAFGNGHRMPSQKAKVFISSADWMVRNMDWRVEAMVPITNPTAHTQILSQ
IMTMNIRDNLQSWILSKDGCWHRMASSSHPFSAHDYFMHNPSLSGRGSAARDKALSEVNR
PRARPDRILED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgcctacgcgacaggattatgaagatattgttcgctctccatatcgatttatt
aatcgtgagttatcatggttggatttcaatcagcgcgtaattgaagaagcagagaatgca
cgaaatccgttattggaaaggattcgttttttatcaatcagtgccagcaatctggatgaa
tttttttctgtgcgcgttgccgggctggttgggcaggttcgtgaaggaatgatcgtgcgt
agcccggatggagcaacgcctgttcaacagttgtccgcggttcgtaaaaaggctcatttt
ttaatagaagagcaacaaagggtttggaagcttcttgaggtagaacttaaagaaaagaat
atttcaattgtaaatagtttagacgctctggatgaacgtgaccgtcaggagctgtcggct
atttttgatgagcgcgtttttcctgttctaacgccattagctgttgatttatcccatccg
ctgccttttatcccaaatatgggattagcgctggtaatgcgtttgaaagatcctgtcacg
cttaatcatgtgatggatgggcttgttcttcttccaacacaagtgtctcgtttcttgcgt
ttgcccgatcgtcttgatgaaaatggtagggcattgggtgagatacgttttatcctgttg
gaagatcttattcgtttgtttgcggatcgcttattcccaggcttgatgattggagcagct
ggggtattgcgcgttatccgtgatacggatgttgagtttgaagatgaagcggaagaccta
gtccgttcttatgaaacagcattaaaacagcgccggcgtggtgtttgtatttatttggcg
ttggatcaaaatttgccagaaactctcgggcgcgagatgggagaagagcttggcgtcggt
gaggaagatattgtcactgtgcctcatctggtgggaattagtgatttaaagcaattgatc
gttgatgatcggcctgatcttgttttcccatcctatacgccacgctttccagagcgtatt
ctggattatgatggggattgctttgcggctatccgctcgaaagatattcttgttcatcat
ccatttgaaagttttgatgttgtcgtacagtttttacgtcaagcggcgctggatcctaat
gtcttagcgattaagcagacactgtaccgtacttctcgtgatagccccattgttcatgcc
cttatagaagctgcggaatcaggaaaatctgtaacggcgatggttgagcttagggctcgt
tttgatgaagaagctaatatccgcctagcgcgtactttagaggccgccggcgtgcaggtg
gtctttggatttgctcatttaaagacgcatgccaaaatgagcttggttgttcgacgggaa
ggcagcacattaaagacttatgctcactttggaacagggaactatcaccccataacagcg
cgtatttatactgacttatcgtttttcacatgtgacccgcagttatctgctgattctgct
cgtttatttaactatatgacgggttacgcgacgcctgctaaaatggaggctctggcgttt
tctcctgtaactattcgttctactttagagcaattgatccgagatgagatttcttttgcc
aaagagggtaagcctgcaaaaatttggctgaaaatgaatagtttggtagatgcagaactg
attgacttactttatgaggcttctcaagcaggagttaaagtggtcggaattgttcgaggg
atttgctgtttgaggccgggtgttgcaggactatctgaaaatattgagattaagtcgatt
gttggtcgttttctcgaacactctcgtattttcgcttttgggaacggccatagaatgcct
tctcaaaaagcaaaggtatttatctcatctgccgattggatggtcagaaatatggattgg
cgggtagaggcaatggttccgattacaaatccgaccgctcatacgcaaattcttagccag
attatgaccatgaatatcagggataatcttcaaagttggattttatctaaagatggatgt
tggcatcgtatggcaagtagttctcatccattttcagcgcatgattatttcatgcataat
ccgtctctttctgggcgagggtcggctgcacgagataaagccctttcagaagtaaaccgt
cctcgtgcacgtccagaccgtattttggaagactaa
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