Sus scrofa (pig): 100156229
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Entry
100156229 CDS
T01009
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X2
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03020
RNA polymerase
ssc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100156229 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100156229 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100156229 (POLR3A)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100156229 (POLR3A)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100156229 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
100156229
NCBI-ProteinID:
XP_001929395
Ensembl:
ENSSSCG00000010327
UniProt:
A0A4X1SJU1
F1S2E6
LinkDB
All DBs
Position
14:complement(80410143..80471740)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEEMRQQAHIQVVSKNLYSQDNNHSPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
ERKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNTCHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANITFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQV
FSVILRPSYDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YRKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQSEPALSKNELLLTTESIMKKNEFLC
CQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILIKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTQTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPSPPRRPLIFD
TDEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacggatgtggccaagaaaataagccacatctgtttt
ggaatgaagtcagctgaggagatgcgccagcaggcgcacatccaggttgtgagtaagaac
ctatacagccaggacaataaccactcccccctgctgtacggggtgcttgaccacaggatg
ggcacgagtgagaaggatcgtccttgtgaaacctgtgggaagaacttggctgactgtctg
ggccactatgggtacattgacctggaactgccatgctttcacgtggggtacttccgtgca
gttataggcatcttacagatgatctgtaaaacctgctgccacatcatgctgtcccaggag
gagaggaagcagtttctggattatctaaagaggcctggcctgacctacctccagaagcgg
gggctaaagaagaaaatctctgataagtgccggaagaagaacacgtgccatcactgtggc
gccttcaacggtactgtaaagaagtgtggattactaaagatcatccacgagaaatacaag
accaacaagaaagtggtggatcccatcgtgtcaaatttccttcagtccttcgaaaccgcc
atcgagcataacaaagaagtagagcctctgctgggaagggcgcaggaaaacttgaatccc
ttagtagttctgaatttatttaaaagaatcccagctgaagatatccctctactcctgatg
aatccagaagctggaaagccctctgatttgattctcacgcgacttttagtgccccctttg
tgtatcagaccctctgtcgtgagtgatttgaagtctggcaccaatgaggatgatctgacg
atgaaattgaccgaaatcatttttctaaacgatgtcatcaaaaagcatcggatatcagga
gctaagacccagatgatcatggaagactgggatttcctgcagctgcagtgtgccctctac
attaacagcgagctctcaggcattcccctcaacatggcgcccaagaaatggaccagaggg
ttcgtccagcgcctgaagggaaaacagggtcgatttagaggcaatctctcaggaaagaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccgaattgatgaagta
gctgttccagtccacgtggccaagatcctaacttttcctgagaaggtgaacaaagcaaac
atcacctttttgaggaaactggttcggaatggccctgaagttcacccaggagccaatttc
attcagcagagacacacacagatgaaaaggtttttgaaatatggaaatagagaaaagatg
gctcaggagctcaaattcggggatatcgtggagagacaccttatagatggagatgtggtc
ttgttcaaccgacagccctcactgcacaaattgagcattatggcacatctggccagggtc
aagccccaccggaccttcagatttaatgagtgtgtctgtacaccatacaatgcggatttt
gatggtgatgaaatgaaccttcatcttcctcaaacagaagaagctaaagcagaagccctt
gttctgatggggactaaagcaaatcttgtaactccaaggaatggagaaccactaattgct
gctattcaagattttctgacaggtgcctacctcctcactcttaaggacactttctttgac
cgagccaaggcttgtcaaatcattgcttcaatattggtgggcaaagatgagaaaatcaaa
gttcgcctgccgccacctacaatactaaagcccgtcaccctgtggacaggaaagcaggtg
ttcagcgtcatcctcagacccagctatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaaaggagaggatctctgtgtcaacgattcctacgtcactatc
cagaacagcgagttgatgagtggcagcatggacaaaggcaccctgggatcaggatccaag
aacaatattttttacattttgctgcgagactgggggcagaatgaagctgccgatgcaatg
tcacggcttgccaggctggctcctgtctacctctctaaccgtgggttctctattgggatt
ggtgatgtcacacctggccaaggactgctgaaggccaagtacgagttgctgaacgctggc
tacagaaaatgtgatgagtacattgaggccttgaacacaggcaagctgcagcagcagccc
ggctgcactgcagaggaaaccctggaggctttgatcctgaaggagctgtctgtgatccgt
gaccatgctggcagcgcctgcctccgggagctggacaagagcaacagccccctcaccatg
gctctgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagctatcagcggctcccgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctgccagctgccaaaggctttgtggctaatagcttttactcc
ggtttgacaccaaccgagtttttcttccacacgatggctggccgggaaggtctggtcgac
acagccgtgaagacagctgaaacaggatacatgcagagaaggctcgtaaagtcccttgaa
gatctttgctcccagtatgatttgacagtccgaagctccacaggagatatcatccagttc
atttacgggggagatggcttagatcctgcagccatggagggaaaagatgaacccctggag
tttaaaagggttctggacaacatcaaagcagtcttcccgtgccagagcgagcctgccctc
agtaaaaacgagctactcctgaccacggagtccatcatgaagaagaacgagtttctctgc
tgccaggacagcttcctgcaggaaataaaaaaattcattaagggggtttctgagaagatc
aagaaaaccagggataaatatggcatcaatgataacggcacgacagagccccgtgtactg
taccagttggaccggatcacccctacccaaatagaaaagtttctagagacgtgtagggac
aagtacatgagggcacagatggagccgggttctgcggtgggtgcactttgtgcccagagc
attggtgagccaggcacccagatgaccctgaagactttccactttgctggtgtggcctcc
atgaacatcaccctgggcgtcccccgcatcaaagagatcatcaacgcttccaaagccatc
agcacgccaatcatcacagcccagctggacaaggatgacgatgcagattacgctcgcctc
gtgaaagggaggattgagaaaaccctcttgggggagatttcggagtatattgaagaggtc
tttcttcctgacgattgctttattctcatcaagctctccctggaacggatcagacttctg
agactggaagtgaacgctgagacggtgaggtattccatctgcatgtccaagctccgagtg
aagcctggcgacgtggcggtccacggtgaggctgtggtatgtgtcaccccccgagagaac
agcaagagctccatgtactacgttctgcagtttctgaaggaggatctccccaaggtggtg
gtgcagggcatcccagaggtgtcccgagctgtcatccacattgacgagcagagcggaaag
gagaagtacaagctcctggtggagggtgacaacctgcgggcagtcatggccacccatggg
gtgaagggcacccagaccacctccaacaacacctatgaggtggagaaaactctgggcatc
gaagctgcccggacgaccatcatcaacgaaatccagtacacgatggtcaaccacggcatg
agcattgaccggcggcatgtgatgctgctctctgaccttatgacctacaagggtgaagtc
ctgggcattactagatttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagaccgccgaccacctctttgacgctgcctattttgggcagaaggactccgtg
tgtggggtgtctgaatgcatcatcatggggatccccatgaacatcggaaccgggctcttc
aagctgctccacaaggccaacagggacccgagccctcctaggaggcctctgatcttcgac
acagatgaattccacatccctcttgtcacatag
DBGET
integrated database retrieval system