Sus scrofa (pig): 100517557
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Entry
100517557 CDS
T01009
Symbol
CACNA2D2
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04010
MAPK signaling pathway
ssc04260
Cardiac muscle contraction
ssc04261
Adrenergic signaling in cardiomyocytes
ssc04921
Oxytocin signaling pathway
ssc05410
Hypertrophic cardiomyopathy
ssc05412
Arrhythmogenic right ventricular cardiomyopathy
ssc05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100517557 (CACNA2D2)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
100517557 (CACNA2D2)
09153 Circulatory system
04260 Cardiac muscle contraction
100517557 (CACNA2D2)
04261 Adrenergic signaling in cardiomyocytes
100517557 (CACNA2D2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100517557 (CACNA2D2)
05412 Arrhythmogenic right ventricular cardiomyopathy
100517557 (CACNA2D2)
05414 Dilated cardiomyopathy
100517557 (CACNA2D2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100517557 (CACNA2D2)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100517557 (CACNA2D2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
dCache_2
Cache_3-Cache_2
T6SS_FHA_C
DUF5610
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
100517557
NCBI-ProteinID:
XP_020924477
Ensembl:
ENSSSCG00000011412
LinkDB
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Position
13:complement(32845110..32988851)
Genome browser
AA seq
1154 aa
AA seq
DB search
MAVPARTCGASRPSPARTARSLPGRGPRPGPSAWRRAVGPPRPLSLLLPPLLLLPLLAAP
GASAYSFPQQHTMQHWARRLEQEIDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVE
KVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDILYYDAKADAELDDPESED
VERGSKASTLRLDFVEDSNFKNKVNYSYTAVQIPTDIYKGSTIILNELNWTEALENVFIE
NRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVD
VSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFK
EAVQGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWP
NRTVRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAG
KEAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRL
TPNYTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMI
DGNKGHKQIRTLVKSLDERYIDEVMRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQI
LQVKLPISKLKDFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTP
DSKQCNNFLLHNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAED
WTENPEPFNASFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGGRTL
RPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKQCGPSSHCEMDCEVNNEDLLCVLIDDG
GFLVLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGSAP
RGIFVPTIADFLNLAWWTSAAAWSLFQQLLYGIIYHSWFQADPAEAEGNPEVRESSCVMK
QTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPMCSQCEAGRLLQKETH
SDGPEQCELVQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPP
RPQPQVHAHASRRL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccggctcggacctgcggcgcctctcggcccagcccggcacggaccgcgcgc
tctctgcccggccgtggcccccggcccggccccagcgcctggcgccgggcggtcgggccc
ccgcgccctctgtcgctgctactgcctccgctgctgctgctgccgctgctcgccgccccc
ggcgcctctgcctacagcttccctcagcagcacacgatgcagcactgggcccggcgcctg
gagcaggagattgatggcgtgatgaggatctttgggggcgtccagcagctccgtgagatc
tacaaagacaacaggaacctgtttgaggtgcaggagaatgagccccagaagttggtggag
aaggtggcgggggacattgagagcctgctagacaggaaggtgcaggccctgaagagattg
gccgatgctgcagagaacttccagaaagcccaccgctggcaggacaacatcaaggaggaa
gacattctgtactatgatgccaaggccgacgctgagctggacgaccctgagagtgaggat
gtggaaagggggtccaaggccagtaccctaaggctggactttgttgaggactcaaacttc
aagaacaaggtcaactattcatacacagctgtgcagatccccacggacatctacaaaggc
tccaccatcattctcaatgagctcaactggacagaagccctggagaatgtgttcattgag
aaccgcaggcaggaccccacactgctgtggcaggtctttggcagcgccacgggagtcact
cgctattatccagccaccccatggcgagcccccaagaaaatcgacctgtacgatgtccga
aggagaccctggtatatccagggggcctcatcgcccaaggacatggtcatcatcgtggat
gtgagtggcagtgtaagcggcttgaccctgaagctgatgaagacatctgtctgtgagatg
ctggacacgctctctgatgatgactatgtgaacgtggcctctttcaatgaaaaggcacag
cctgtgtcatgcttcacacacttggtacaggccaacgtgcgtaacaagaaggtgttcaag
gaagctgtgcagggcatggtggctaagggcaccacaggctacaaggccggctttgagtat
gccttcgaccagctgcaaaattccaacatcactcgtgccaactgcaataagatgatcatg
atgttcacggatggtggcgaggaccgtgtgcaggacgtctttgagaagtacaattggccc
aatcggacggttcgcgtgttcactttctccgtggggcagcacaactatgacgtcactccc
ctgcaatggatggcctgtgccaacaaaggttactattttgagatcccttccattggcgcc
atccgcatcaatacgcaggaatacctagacgtgttgggcaggcccatggtgctggcaggc
aaggaggccaagcaggtgcaatggaccaacgtgtacgaggatgcactggggttggggttg
gtggtgacagggaccctccctgttttcaacctgacacaggacggccctggggaaaagaag
aaccagctgatcctgggtgtgatgggcattgatgtggctctgaatgacatcaagaggctg
actcccaactacacgcttggagccaacggctacgtgtttgccattgacctgaatggctat
gtgttgctgcaccccaacctcaagccccagaccaccaacttccgggagcctgtgactctg
gacttcctggatgcagagctggaggatgagaacaaagaggagatccgtcggagcatgatc
gatggcaacaagggtcacaagcagatcagaaccctggtcaagtccctggatgagaggtac
atagacgaggtgatgcggaactacacctgggtgcctataaggagcaccaactacagccta
gggctagtgctcccgccctacagcaccttctacctccaagccaacctcagtgaccagatc
ctgcaggtcaagttgccaatcagcaaactgaaggattttgagttcctgctccccagcagc
tttgagtctgaaggacatgttttcattgctcccagagagtattgcaaggacctgaatgct
tcagacaacaacaccgagttcctgaaaaacttcattgagctcatggagaaagtgactcca
gactccaagcagtgcaacaacttccttctgcacaacctgatcttggacacaggcatcaca
cagcagctggtggagcgtgtgtggcgggaccaggatctcaacacgtacagccttctggcc
gtgttcgccgccactgatggcggcatcactcgtgtattccccaacaaggcagctgaggac
tggacagagaaccccgagcccttcaatgccagcttctatcgccgcagcctagacaaccat
ggctacgtcttcaagccaccgcatcaggatgccctgttaaggccactggagctggagaat
gacacggtgggcatcctggtcagcacggctgtggagctcagcctaggtggacgcacactg
agaccagcagtcgtgggcgtgaaactggacctagaggcatgggctgagaagttcaaggtg
ctagccagcaaccgtacccaccaggaccagcctcagaagcagtgcggccccagcagccac
tgtgagatggactgcgaagttaacaatgaggacctgctctgtgtcctcattgacgacggg
ggattcctggtactgtcaaaccagaaccatcagtgggaccaggtgggcaggttcttcagt
gaggtggatgccaacctgatgctggcactctacaataactccttctacacccgcaaggag
tcctatgactatcaagcggcctgtgctccccagcccccaggcaacttgggatctgcaccc
cgaggcatctttgtgcccaccattgcagacttccttaacctagcttggtggacctctgct
gcggcctggtctttgttccagcagcttctctatggcattatctaccacagctggttccag
gcagacccggcggaggccgaagggaacccggaggtgcgcgagagcagctgcgtcatgaaa
cagacccagtactacttcggttcggtgaacgcctcctacaacgccatcatcgactgcgga
aactgttccaggctcttccacgcgcagaggctgaccaacaccaaccttctcttcgtggtg
gccgagaagccgatgtgcagccagtgtgaggcaggccggctgctgcagaaggaaacacac
tcggacggcccggagcagtgtgaactggtgcagagaccacgataccggagaggcccacac
atttgcttcgactacaatgccacggaagatacttcagactgcggccgtggagcctccttc
ccgccgtcgttgggcgtcctggtgtccctgcagctgctgctcctcctaggcctgcctccc
cggccacagcctcaagtccacgcccatgcttctcgccgcctctga
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